PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
SIchi23G0003580.1 Terpenoid BAHD medium pass
SIchi23G0003580.2 Terpenoid BAHD medium pass
SIchi24G0000840.1 Terpenoid BAHD medium pass
SIchi24G0000840.2 Terpenoid BAHD low borderline
SIchi24G0000840.3 Terpenoid BAHD medium pass
SIchi24G0002630.1 Terpenoid BAHD medium pass
SIchi24G0003690.1 Terpenoid BAHD medium pass
SIchi24G0003690.2 Terpenoid BAHD medium pass
SIchi24G0003690.3 Terpenoid BAHD medium pass
SIchi24G0003690.4 Terpenoid BAHD medium pass
SIchi24G0003690.5 Terpenoid BAHD medium pass
SIchi24G0003940.1 Terpenoid BAHD medium pass
SIchi25G0000640.1 Terpenoid BAHD medium pass
SIchi25G0000640.2 Terpenoid BAHD medium pass
SIchi25G0002150.1 Terpenoid BAHD medium pass
SIchi25G0005600.1 Terpenoid BAHD medium pass
SIchi25G0005600.2 Terpenoid BAHD medium pass
SIchi25G0005600.3 Terpenoid BAHD medium pass
SIchi26G0003230.1 Terpenoid BAHD medium pass
SIchi26G0003400.1 Terpenoid BAHD medium pass
SIchi26G0003410.1 Terpenoid BAHD low borderline
SIchi26G0003420.1 Terpenoid BAHD medium pass
SIchi26G0004690.1 Terpenoid BAHD medium pass
SIchi26G0004690.2 Terpenoid BAHD medium pass
SIchi04G0009550.1 Terpenoid CMK/IspE high pass
SIchi25G0003650.1 Terpenoid CMK/IspE low borderline
SIchi03G0001370.1 Terpenoid CYP71 low borderline
SIchi03G0001370.2 Terpenoid CYP71 low borderline
SIchi03G0005510.1 Terpenoid CYP71 low borderline
SIchi03G0011110.1 Terpenoid CYP71 medium borderline
SIchi04G0001220.1 Terpenoid CYP71 medium borderline
SIchi04G0001240.1 Terpenoid CYP71 medium borderline
SIchi04G0001450.1 Terpenoid CYP71 low borderline
SIchi04G0010340.1 Terpenoid CYP71 low borderline
SIchi04G0010340.3 Terpenoid CYP71 low borderline
SIchi05G0001140.1 Terpenoid CYP71 low borderline
SIchi05G0001140.2 Terpenoid CYP71 low borderline
SIchi05G0001140.3 Terpenoid CYP71 low borderline
SIchi05G0001140.4 Terpenoid CYP71 low borderline
SIchi05G0001140.5 Terpenoid CYP71 low borderline
SIchi05G0001140.6 Terpenoid CYP71 low borderline
SIchi06G0001040.1 Terpenoid CYP71 low borderline
SIchi06G0010100.1 Terpenoid CYP71 medium borderline
SIchi08G0000110.1 Terpenoid CYP71 low borderline
SIchi08G0000110.2 Terpenoid CYP71 low borderline
SIchi09G0004130.1 Terpenoid CYP71 medium pass
SIchi09G0004130.2 Terpenoid CYP71 medium pass
SIchi09G0004130.3 Terpenoid CYP71 medium pass
SIchi09G0004130.4 Terpenoid CYP71 medium pass
SIchi12G0000680.1 Terpenoid CYP71 medium pass