PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

2205
Candidate Protein Records
1765
Pathway-Level Records
4100
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
SIchi06G0009600.1 Alkaloid CYP719 medium borderline
SIchi26G0003860.1 Alkaloid CYP80B1 medium borderline
SIchi26G0003860.2 Alkaloid CYP80B1 medium borderline
SIchi26G0003860.3 Alkaloid CYP80B1 medium borderline
SIchi14G0007910.1 Alkaloid CYP80F1 medium borderline
SIchi14G0007910.2 Alkaloid CYP80F1 medium borderline
SIchi23G0002820.1 Alkaloid CYP80F1 medium borderline
SIchi01G0007670.1 Alkaloid G8O/G8H medium borderline
SIchi01G0007670.2 Alkaloid G8O/G8H medium borderline
SIchi01G0008980.1 Alkaloid G8O/G8H medium borderline
SIchi01G0010710.1 Alkaloid G8O/G8H medium borderline
SIchi02G0002020.1 Alkaloid G8O/G8H low borderline
SIchi02G0007670.1 Alkaloid G8O/G8H medium borderline
SIchi02G0007670.2 Alkaloid G8O/G8H medium borderline
SIchi02G0009400.1 Alkaloid G8O/G8H medium borderline
SIchi02G0009400.2 Alkaloid G8O/G8H medium borderline
SIchi03G0003380.1 Alkaloid G8O/G8H medium borderline
SIchi04G0001280.1 Alkaloid G8O/G8H low borderline
SIchi04G0001410.1 Alkaloid G8O/G8H medium borderline
SIchi04G0001440.1 Alkaloid G8O/G8H medium borderline
SIchi11G0004940.1 Alkaloid G8O/G8H medium borderline
SIchi20G0001280.1 Alkaloid G8O/G8H low borderline
SIchi20G0004860.1 Alkaloid G8O/G8H medium borderline
SIchi02G0003500.1 Alkaloid GES medium pass
SIchi03G0009220.1 Alkaloid GES medium pass
SIchi03G0009220.2 Alkaloid GES medium pass
SIchi03G0009220.3 Alkaloid GES medium pass
SIchi03G0009230.1 Alkaloid GES medium pass
SIchi03G0009240.1 Alkaloid GES medium pass
SIchi03G0009250.1 Alkaloid GES medium pass
SIchi03G0009260.1 Alkaloid GES medium pass
SIchi03G0009270.1 Alkaloid GES medium pass
SIchi03G0009280.1 Alkaloid GES medium pass
SIchi03G0009280.2 Alkaloid GES medium pass
SIchi03G0009280.3 Alkaloid GES medium pass
SIchi03G0009280.4 Alkaloid GES medium pass
SIchi03G0009290.1 Alkaloid GES low borderline
SIchi03G0009310.1 Alkaloid GES medium pass
SIchi03G0009320.1 Alkaloid GES medium pass
SIchi03G0009330.1 Alkaloid GES medium pass
SIchi03G0009330.2 Alkaloid GES medium pass
SIchi03G0009330.3 Alkaloid GES medium pass
SIchi03G0009330.4 Alkaloid GES medium pass
SIchi03G0009340.1 Alkaloid GES low borderline
SIchi03G0009350.1 Alkaloid GES medium pass
SIchi05G0007910.1 Alkaloid GES medium pass
SIchi05G0008400.1 Alkaloid GES medium pass
SIchi05G0008400.2 Alkaloid GES medium pass
SIchi06G0006440.1 Alkaloid GES low borderline
SIchi06G0006450.1 Alkaloid GES medium pass