PlantSME Plant secondary metabolism enzyme database

Simmondsia chinensis (simmondsia_chinensis)

Imported from atlas release summary for Simmondsia chinensis.

1765
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 476 19 BAHD (195) View species results
Alkaloid pathway 472 21 NMT (101) View species results
Phenylpropanoid pathway 383 13 POD (160) View species results
Flavonoid pathway 172 10 UFGT (94) View species results
Rosmarinic acid pathway 131 7 C4H (45) View species results
Steroid pathway 131 11 SMT1/SMT2/SMT3 (49) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1322 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 308 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
SIchi17G0004420.2 Flavonoid F3H low borderline
SIchi17G0005290.1 Flavonoid F3H medium borderline
SIchi17G0005290.2 Flavonoid F3H medium borderline
SIchi17G0005290.3 Flavonoid F3H medium borderline
SIchi17G0005300.1 Flavonoid F3H medium borderline
SIchi17G0005300.2 Flavonoid F3H medium borderline
SIchi17G0005300.3 Flavonoid F3H medium borderline
SIchi17G0005320.1 Flavonoid F3H low borderline
SIchi17G0005350.1 Flavonoid F3H medium borderline
SIchi17G0005360.1 Flavonoid F3H medium borderline
SIchi17G0005370.1 Flavonoid F3H medium borderline
SIchi17G0005410.1 Flavonoid F3H medium borderline
SIchi17G0007610.1 Flavonoid F3H medium borderline
SIchi18G0001440.1 Flavonoid F3H low borderline
SIchi18G0001450.1 Flavonoid F3H low borderline
SIchi18G0001730.2 Flavonoid F3H low borderline
SIchi18G0001730.3 Flavonoid F3H low borderline
SIchi18G0004050.1 Flavonoid F3H medium borderline
SIchi18G0004050.2 Flavonoid F3H medium borderline
SIchi19G0000050.1 Flavonoid F3H medium borderline
SIchi19G0000050.2 Flavonoid F3H medium borderline
SIchi19G0000050.3 Flavonoid F3H medium borderline
SIchi19G0003510.1 Flavonoid F3H medium borderline
SIchi19G0003540.1 Flavonoid F3H medium borderline
SIchi19G0003570.1 Flavonoid F3H medium borderline
SIchi19G0003590.1 Flavonoid F3H medium borderline
SIchi19G0005070.1 Flavonoid F3H medium borderline
SIchi20G0003010.1 Flavonoid F3H medium borderline
SIchi20G0005810.1 Flavonoid F3H medium borderline
SIchi20G0005810.2 Flavonoid F3H medium borderline
SIchi20G0005810.3 Flavonoid F3H medium borderline
SIchi21G0006450.1 Flavonoid F3H medium pass
SIchi23G0000810.1 Flavonoid F3H medium borderline
SIchi23G0006990.1 Flavonoid F3H medium pass
SIchi24G0000130.1 Flavonoid F3H medium borderline
SIchi24G0000130.2 Flavonoid F3H medium pass
SIchi24G0001890.1 Flavonoid F3H medium borderline
SIchi24G0001900.1 Flavonoid F3H medium borderline
SIchi24G0003090.1 Flavonoid F3H medium pass
SIchi24G0003090.2 Flavonoid F3H medium pass
SIchi24G0003110.1 Flavonoid F3H medium borderline
SIchi24G0003120.1 Flavonoid F3H medium borderline
SIchi25G0003830.1 Flavonoid F3H medium borderline
SIchi25G0003840.1 Flavonoid F3H medium borderline
SIchi25G0003880.1 Flavonoid F3H medium borderline
SIchi25G0003890.1 Flavonoid F3H medium borderline
SIchi25G0003890.2 Flavonoid F3H medium borderline
SIchi25G0003900.1 Flavonoid F3H medium borderline
SIchi25G0003920.1 Flavonoid F3H medium borderline
SIchi25G0003950.1 Flavonoid F3H medium borderline