PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

2047
Candidate Protein Records
1868
Pathway-Level Records
4373
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
PON84851.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON84853.1[Trema Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON84857.1[Trema Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON85886.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON85950.1[Trema Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON89150.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON90389.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON93018.1[Trema Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON93038.1[Trema Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON94472.1[Trema Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON94473.1[Trema Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON95191.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON97064.1[Trema Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON97067.1[Trema Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON97069.1[Trema Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON97070.1[Trema Phenylpropanoid CAD medium pass CAD__00009__sp_P42734_CADH9_ARATH
PON97072.1[Trema Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON97073.1[Trema Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON97075.1[Trema Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON97076.1[Trema Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON97080.1[Trema Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON97091.1[Trema Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
PON97539.1[Trema Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON98843.1[Trema Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
PON98948.1[Trema Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
PON99282.1[Trema Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
PON99694.1[Trema Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
POO03393.1[Trema Phenylpropanoid CAD low borderline CAD__00008__sp_O49482_CADH5_ARATH
POO03683.1[Trema Phenylpropanoid CAD low borderline CAD__00013__sp_Q0JA75_CADH7_ORYSJ