PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
PON88087.1[Trema Alkaloid 7DLGT medium pass
PON88088.1[Trema Alkaloid 7DLGT low borderline
PON88089.1[Trema Alkaloid 7DLGT low borderline
PON88091.1[Trema Alkaloid 7DLGT medium pass
PON88092.1[Trema Alkaloid 7DLGT medium pass
PON88093.1[Trema Alkaloid 7DLGT low borderline
PON88094.1[Trema Alkaloid 7DLGT low borderline
PON88097.1[Trema Alkaloid 7DLGT medium pass
PON89238.1[Trema Alkaloid 7DLGT low borderline
PON89239.1[Trema Alkaloid 7DLGT low borderline
PON89240.1[Trema Alkaloid 7DLGT low borderline
PON89624.1[Trema Alkaloid 7DLGT medium pass
PON89833.1[Trema Alkaloid 7DLGT low borderline
PON89834.1[Trema Alkaloid 7DLGT low borderline
PON89962.1[Trema Alkaloid 7DLGT low borderline
PON90344.1[Trema Alkaloid 7DLGT medium pass
PON90345.1[Trema Alkaloid 7DLGT medium pass
PON90349.1[Trema Alkaloid 7DLGT low borderline
PON90352.1[Trema Alkaloid 7DLGT high pass
PON90922.1[Trema Alkaloid 7DLGT medium pass
PON90932.1[Trema Alkaloid 7DLGT medium pass
PON90934.1[Trema Alkaloid 7DLGT medium pass
PON91313.1[Trema Alkaloid 7DLGT low borderline
PON92777.1[Trema Alkaloid 7DLGT low borderline
PON92967.1[Trema Alkaloid 7DLGT low borderline
PON94065.1[Trema Alkaloid 7DLGT medium pass
PON94695.1[Trema Alkaloid 7DLGT low borderline
PON94697.1[Trema Alkaloid 7DLGT medium pass
PON95494.1[Trema Alkaloid 7DLGT low borderline
PON95495.1[Trema Alkaloid 7DLGT low borderline
PON95497.1[Trema Alkaloid 7DLGT low borderline
PON95499.1[Trema Alkaloid 7DLGT medium pass
PON95501.1[Trema Alkaloid 7DLGT medium pass
PON95502.1[Trema Alkaloid 7DLGT low borderline
PON95504.1[Trema Alkaloid 7DLGT low borderline
PON95508.1[Trema Alkaloid 7DLGT low borderline
PON95605.1[Trema Alkaloid 7DLGT medium pass
PON96324.1[Trema Alkaloid 7DLGT low borderline
PON96326.1[Trema Alkaloid 7DLGT low borderline
PON96690.1[Trema Alkaloid 7DLGT low borderline
PON96949.1[Trema Alkaloid 7DLGT low borderline
PON96950.1[Trema Alkaloid 7DLGT medium pass
PON96954.1[Trema Alkaloid 7DLGT medium pass
PON96955.1[Trema Alkaloid 7DLGT low borderline
PON97370.1[Trema Alkaloid 7DLGT low borderline
PON97371.1[Trema Alkaloid 7DLGT low borderline
PON97538.1[Trema Alkaloid 7DLGT high pass
PON97972.1[Trema Alkaloid 7DLGT low borderline
PON97994.1[Trema Alkaloid 7DLGT low borderline
PON98221.1[Trema Alkaloid 7DLGT low borderline