PlantSME Plant secondary metabolism enzyme database

Trema orientale (trema_orientale)

Imported from atlas release summary for Trema orientale.

1868
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 556 20 BAHD (218) View species results
Alkaloid pathway 365 25 7DLGT (96) View species results
Phenylpropanoid pathway 356 13 POD (138) View species results
Flavonoid pathway 272 13 UFGT (190) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 111 11 CAS (57) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1612 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 375 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
PON98224.1[Trema Alkaloid 7DLGT low borderline
PON98226.1[Trema Alkaloid 7DLGT low borderline
PON98227.1[Trema Alkaloid 7DLGT medium pass
PON98229.1[Trema Alkaloid 7DLGT medium pass
PON98232.1[Trema Alkaloid 7DLGT medium pass
PON98234.1[Trema Alkaloid 7DLGT medium pass
PON98239.1[Trema Alkaloid 7DLGT medium pass
PON98696.1[Trema Alkaloid 7DLGT low borderline
PON98881.1[Trema Alkaloid 7DLGT medium pass
POO01712.1[Trema Alkaloid 7DLGT low borderline
POO01713.1[Trema Alkaloid 7DLGT low borderline
POO01716.1[Trema Alkaloid 7DLGT medium pass
POO01717.1[Trema Alkaloid 7DLGT medium pass
POO01719.1[Trema Alkaloid 7DLGT low borderline
POO01807.1[Trema Alkaloid 7DLGT low borderline
POO01809.1[Trema Alkaloid 7DLGT low borderline
POO01810.1[Trema Alkaloid 7DLGT medium pass
POO01813.1[Trema Alkaloid 7DLGT low borderline
POO01815.1[Trema Alkaloid 7DLGT low borderline
POO01817.1[Trema Alkaloid 7DLGT medium pass
POO01818.1[Trema Alkaloid 7DLGT low borderline
POO01820.1[Trema Alkaloid 7DLGT low borderline
POO01821.1[Trema Alkaloid 7DLGT low borderline
POO02591.1[Trema Alkaloid 7DLGT medium pass
POO03148.1[Trema Alkaloid 7DLGT medium pass
POO03149.1[Trema Alkaloid 7DLGT medium pass
POO03336.1[Trema Alkaloid 7DLGT medium pass
POO03401.1[Trema Alkaloid 7DLGT low borderline
POO03402.1[Trema Alkaloid 7DLGT low borderline
POO03543.1[Trema Alkaloid 7DLGT low borderline
POO03544.1[Trema Alkaloid 7DLGT low borderline
POO03854.1[Trema Alkaloid 7DLGT medium pass
PON39520.1[Trema Alkaloid 7DLH medium borderline
PON41238.1[Trema Alkaloid 7DLH medium borderline
PON41239.1[Trema Alkaloid 7DLH medium borderline
PON41241.1[Trema Alkaloid 7DLH medium borderline
PON56872.1[Trema Alkaloid 7DLH low borderline
PON64466.1[Trema Alkaloid 7DLH medium borderline
PON64468.1[Trema Alkaloid 7DLH medium borderline
PON75852.1[Trema Alkaloid 7DLH medium borderline
PON81622.1[Trema Alkaloid 7DLH medium borderline
PON84559.1[Trema Alkaloid 7DLH medium borderline
PON84660.1[Trema Alkaloid 7DLH medium borderline
PON90852.1[Trema Alkaloid 7DLH medium borderline
PON90853.1[Trema Alkaloid 7DLH medium borderline
PON92492.1[Trema Alkaloid 7DLH medium borderline
PON97248.1[Trema Alkaloid 7DLH medium pass
PON97251.1[Trema Alkaloid 7DLH medium borderline
PON97252.1[Trema Alkaloid 7DLH medium borderline
PON97253.1[Trema Alkaloid 7DLH medium borderline