PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status Best Target
Agluscaffold11730_cov1060029340 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold11730_cov1060029350 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold11730_cov1060029360 Alkaloid 7DLH medium pass 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold11730_cov1060029370 Alkaloid 7DLH medium pass 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold13233_cov970048080 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold13233_cov970048090 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold19263_cov960110190 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold21987_cov1020133540 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold23835_cov960146900 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold26490_cov860161400 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold26490_cov860161410 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold40617_cov850233260 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold424749_cov1020260560 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold425543_cov920270600 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold45751_cov970291780 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold61560_cov1020348650 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold7040_cov1050372190 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold7557_cov1030385200 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold78712_cov930392710 Alkaloid 7DLH medium pass 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold78712_cov930392750 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold78712_cov930392830 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold78712_cov930392840 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold78712_cov930392870 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold7935_cov790393880 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO
Agluscaffold9041_cov1050416200 Alkaloid 7DLH medium borderline 7DLH__00001__sp_U5NE19_7DLH_CATRO