PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
Reset
Gene Pathway Family Confidence Status
Agluscaffold10937_cov680017630 Alkaloid IO medium borderline
Agluscaffold11207_cov1010021870 Alkaloid IO medium borderline
Agluscaffold11899_cov1060031130 Alkaloid IO low borderline
Agluscaffold12576_cov940039330 Alkaloid IO medium borderline
Agluscaffold13228_cov870047800 Alkaloid IO medium borderline
Agluscaffold13228_cov870047810 Alkaloid IO medium borderline
Agluscaffold13228_cov870047820 Alkaloid IO medium borderline
Agluscaffold13228_cov870047830 Alkaloid IO medium borderline
Agluscaffold1380_cov1090056380 Alkaloid IO medium borderline
Agluscaffold16854_cov890088450 Alkaloid IO low borderline
Agluscaffold1691_cov680088570 Alkaloid IO medium borderline
Agluscaffold18384_cov1050102390 Alkaloid IO low borderline
Agluscaffold18477_cov990102860 Alkaloid IO medium borderline
Agluscaffold19262_cov910110160 Alkaloid IO medium borderline
Agluscaffold196628_cov990113730 Alkaloid IO medium borderline
Agluscaffold2311_cov840143100 Alkaloid IO medium borderline
Agluscaffold24056_cov700147950 Alkaloid IO medium pass
Agluscaffold2582_cov990158220 Alkaloid IO low borderline
Agluscaffold3152_cov740188980 Alkaloid IO medium borderline
Agluscaffold34126_cov1110204030 Alkaloid IO medium borderline
Agluscaffold34945_cov940209420 Alkaloid IO medium borderline
Agluscaffold37622_cov1040221420 Alkaloid IO low borderline
Agluscaffold424409_cov1070244760 Alkaloid IO low borderline
Agluscaffold424538_cov1080250700 Alkaloid IO low borderline
Agluscaffold427956_cov730281040 Alkaloid IO medium borderline
Agluscaffold42853_cov1040281610 Alkaloid IO medium borderline
Agluscaffold46329_cov1090295400 Alkaloid IO medium borderline
Agluscaffold46329_cov1090295450 Alkaloid IO medium borderline
Agluscaffold5802_cov950337180 Alkaloid IO medium borderline
Agluscaffold5802_cov950337190 Alkaloid IO medium borderline
Agluscaffold5802_cov950337240 Alkaloid IO medium borderline
Agluscaffold5802_cov950337250 Alkaloid IO medium borderline
Agluscaffold60713_cov1040346020 Alkaloid IO medium borderline
Agluscaffold60713_cov1040346070 Alkaloid IO medium borderline
Agluscaffold6608_cov950362490 Alkaloid IO low borderline
Agluscaffold6711_cov900365250 Alkaloid IO low borderline
Agluscaffold7698_cov720387810 Alkaloid IO medium pass
Agluscaffold8873_cov960413900 Alkaloid IO medium borderline
Agluscaffold9245_cov1050419980 Alkaloid IO medium borderline