PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Agluscaffold10445_cov860009820 Steroid DWF4/CYP90B1 low borderline
Agluscaffold11507_cov1050024810 Steroid DWF4/CYP90B1 low borderline
Agluscaffold11730_cov1060029340 Steroid DWF4/CYP90B1 low borderline
Agluscaffold11730_cov1060029350 Steroid DWF4/CYP90B1 low borderline
Agluscaffold12380_cov1080037180 Steroid DWF4/CYP90B1 low borderline
Agluscaffold12576_cov940039290 Steroid DWF4/CYP90B1 low borderline
Agluscaffold1270_cov1060041370 Steroid DWF4/CYP90B1 low borderline
Agluscaffold13340_cov1000049900 Steroid DWF4/CYP90B1 low borderline
Agluscaffold13506_cov1020051090 Steroid DWF4/CYP90B1 low borderline
Agluscaffold1395_cov1040057980 Steroid DWF4/CYP90B1 low borderline
Agluscaffold1518_cov1050071490 Steroid DWF4/CYP90B1 low borderline
Agluscaffold15599_cov830074670 Steroid DWF4/CYP90B1 low borderline
Agluscaffold16107_cov1070080930 Steroid DWF4/CYP90B1 low borderline
Agluscaffold16107_cov1070080940 Steroid DWF4/CYP90B1 low borderline
Agluscaffold16347_cov980083780 Steroid DWF4/CYP90B1 low borderline
Agluscaffold16596_cov810086490 Steroid DWF4/CYP90B1 low borderline
Agluscaffold1687_cov930088530 Steroid DWF4/CYP90B1 low borderline
Agluscaffold17599_cov1060095210 Steroid DWF4/CYP90B1 low borderline
Agluscaffold17652_cov1040096300 Steroid DWF4/CYP90B1 low borderline
Agluscaffold17652_cov1040096310 Steroid DWF4/CYP90B1 low borderline
Agluscaffold18477_cov990102860 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold19026_cov1000106820 Steroid DWF4/CYP90B1 low borderline
Agluscaffold19223_cov1070109060 Steroid DWF4/CYP90B1 low borderline
Agluscaffold19393_cov1070111500 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold1977_cov960115160 Steroid DWF4/CYP90B1 low borderline
Agluscaffold20621_cov980123860 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold21166_cov880127650 Steroid DWF4/CYP90B1 low borderline
Agluscaffold21477_cov1070129580 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold219777_cov960133270 Steroid DWF4/CYP90B1 low borderline
Agluscaffold22203_cov670135200 Steroid DWF4/CYP90B1 low borderline
Agluscaffold2231_cov950136220 Steroid DWF4/CYP90B1 low borderline
Agluscaffold22501_cov980137830 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold22822_cov860141560 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold24662_cov1010150720 Steroid DWF4/CYP90B1 low borderline
Agluscaffold24662_cov1010150800 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold25560_cov1040156960 Steroid DWF4/CYP90B1 low borderline
Agluscaffold2609_cov800159870 Steroid DWF4/CYP90B1 low borderline
Agluscaffold26490_cov860161400 Steroid DWF4/CYP90B1 low borderline
Agluscaffold26490_cov860161410 Steroid DWF4/CYP90B1 low borderline
Agluscaffold27727_cov860167880 Steroid DWF4/CYP90B1 low borderline
Agluscaffold28036_cov1030169730 Steroid DWF4/CYP90B1 low borderline
Agluscaffold2883_cov1050175350 Steroid DWF4/CYP90B1 low borderline
Agluscaffold29537_cov1030178800 Steroid DWF4/CYP90B1 low borderline
Agluscaffold34427_cov890205800 Steroid DWF4/CYP90B1 low borderline
Agluscaffold34945_cov940209420 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold3545_cov1010212640 Steroid DWF4/CYP90B1 low borderline
Agluscaffold3545_cov1010212650 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold36022_cov1000215000 Steroid DWF4/CYP90B1 low borderline
Agluscaffold36147_cov1000215100 Steroid DWF4/CYP90B1 low borderline
Agluscaffold37560_cov630221220 Steroid DWF4/CYP90B1 medium borderline