PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Agluscaffold1078_cov970015840 Rosmarinic Acid 4CL medium pass
Agluscaffold11162_cov920020900 Rosmarinic Acid 4CL low borderline
Agluscaffold11656_cov1050026830 Rosmarinic Acid 4CL medium pass
Agluscaffold124360_cov1070037440 Rosmarinic Acid 4CL low borderline
Agluscaffold124360_cov1070037450 Rosmarinic Acid 4CL medium pass
Agluscaffold1251_cov1000038310 Rosmarinic Acid 4CL medium pass
Agluscaffold12995_cov1030045010 Rosmarinic Acid 4CL medium pass
Agluscaffold14475_cov1060062680 Rosmarinic Acid 4CL medium pass
Agluscaffold14811_cov1090067780 Rosmarinic Acid 4CL medium pass
Agluscaffold14907_cov1050068740 Rosmarinic Acid 4CL medium pass
Agluscaffold14928_cov1050068990 Rosmarinic Acid 4CL medium pass
Agluscaffold150199_cov980069690 Rosmarinic Acid 4CL medium pass
Agluscaffold169461_cov1070089000 Rosmarinic Acid 4CL medium pass
Agluscaffold17727_cov800097090 Rosmarinic Acid 4CL low borderline
Agluscaffold19263_cov960110180 Rosmarinic Acid 4CL medium pass
Agluscaffold19488_cov1050112560 Rosmarinic Acid 4CL low borderline
Agluscaffold2219_cov990135190 Rosmarinic Acid 4CL medium pass
Agluscaffold3033_cov1010183290 Rosmarinic Acid 4CL low borderline
Agluscaffold3033_cov1010183300 Rosmarinic Acid 4CL low borderline
Agluscaffold33399_cov960200950 Rosmarinic Acid 4CL medium pass
Agluscaffold35240_cov900210790 Rosmarinic Acid 4CL medium pass
Agluscaffold35240_cov900210800 Rosmarinic Acid 4CL low borderline
Agluscaffold41143_cov1070235390 Rosmarinic Acid 4CL low borderline
Agluscaffold424421_cov990245560 Rosmarinic Acid 4CL low borderline
Agluscaffold424798_cov1090262240 Rosmarinic Acid 4CL medium pass
Agluscaffold425597_cov1050272440 Rosmarinic Acid 4CL low borderline
Agluscaffold4702_cov890298770 Rosmarinic Acid 4CL low borderline
Agluscaffold51559_cov1010315650 Rosmarinic Acid 4CL medium pass
Agluscaffold51846_cov1040316770 Rosmarinic Acid 4CL low borderline
Agluscaffold55195_cov1010327620 Rosmarinic Acid 4CL medium pass
Agluscaffold5680_cov1070333390 Rosmarinic Acid 4CL medium pass
Agluscaffold60096_cov1070344400 Rosmarinic Acid 4CL medium pass
Agluscaffold62584_cov960351290 Rosmarinic Acid 4CL medium pass
Agluscaffold65748_cov1080360580 Rosmarinic Acid 4CL medium pass
Agluscaffold66059_cov1080362070 Rosmarinic Acid 4CL low borderline
Agluscaffold736_cov1080380420 Rosmarinic Acid 4CL medium pass
Agluscaffold7545_cov870384750 Rosmarinic Acid 4CL medium pass
Agluscaffold7753_cov1000389110 Rosmarinic Acid 4CL low borderline
Agluscaffold840_cov900403740 Rosmarinic Acid 4CL low borderline
Agluscaffold861_cov1080407980 Rosmarinic Acid 4CL low borderline
Agluscaffold89160_cov1020414230 Rosmarinic Acid 4CL medium pass
Agluscaffold90455_cov960416420 Rosmarinic Acid 4CL medium pass
Agluscaffold10043_cov1470000960 Rosmarinic Acid C4H low borderline
Agluscaffold10445_cov860009770 Rosmarinic Acid C4H low borderline
Agluscaffold10445_cov860009820 Rosmarinic Acid C4H low borderline
Agluscaffold105568_cov1050011970 Rosmarinic Acid C4H low borderline
Agluscaffold10937_cov680017630 Rosmarinic Acid C4H low borderline
Agluscaffold11207_cov1010021870 Rosmarinic Acid C4H low borderline
Agluscaffold11361_cov1080023390 Rosmarinic Acid C4H low borderline
Agluscaffold11507_cov1050024810 Rosmarinic Acid C4H low borderline