PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
Agluscaffold10043_cov1470000960 Alkaloid G8O/G8H medium borderline
Agluscaffold11967_cov980031720 Alkaloid G8O/G8H medium borderline
Agluscaffold12576_cov940039270 Alkaloid G8O/G8H medium borderline
Agluscaffold12660_cov980040760 Alkaloid G8O/G8H medium borderline
Agluscaffold1270_cov1060041370 Alkaloid G8O/G8H medium borderline
Agluscaffold1395_cov1040057980 Alkaloid G8O/G8H low borderline
Agluscaffold1691_cov680088640 Alkaloid G8O/G8H low borderline
Agluscaffold1691_cov680088670 Alkaloid G8O/G8H medium borderline
Agluscaffold18776_cov730105430 Alkaloid G8O/G8H low borderline
Agluscaffold19026_cov1000106820 Alkaloid G8O/G8H medium borderline
Agluscaffold19262_cov910110170 Alkaloid G8O/G8H medium borderline
Agluscaffold1977_cov960115160 Alkaloid G8O/G8H medium borderline
Agluscaffold20335_cov980121030 Alkaloid G8O/G8H low borderline
Agluscaffold2203_cov1060133960 Alkaloid G8O/G8H medium borderline
Agluscaffold2311_cov840143130 Alkaloid G8O/G8H low borderline
Agluscaffold25496_cov1040156640 Alkaloid G8O/G8H medium borderline
Agluscaffold2609_cov800159710 Alkaloid G8O/G8H medium borderline
Agluscaffold2609_cov800159770 Alkaloid G8O/G8H medium borderline
Agluscaffold2609_cov800159800 Alkaloid G8O/G8H medium borderline
Agluscaffold2609_cov800159850 Alkaloid G8O/G8H medium borderline
Agluscaffold28679_cov1060173880 Alkaloid G8O/G8H medium pass
Agluscaffold29537_cov1030178800 Alkaloid G8O/G8H medium borderline
Agluscaffold30866_cov1030185440 Alkaloid G8O/G8H medium borderline
Agluscaffold34126_cov1110204020 Alkaloid G8O/G8H medium borderline
Agluscaffold37333_cov790220420 Alkaloid G8O/G8H low borderline
Agluscaffold4143_cov670238470 Alkaloid G8O/G8H medium borderline
Agluscaffold424620_cov970255080 Alkaloid G8O/G8H medium borderline
Agluscaffold42569_cov1020274500 Alkaloid G8O/G8H low borderline
Agluscaffold4795_cov940302090 Alkaloid G8O/G8H medium borderline
Agluscaffold53_cov990324730 Alkaloid G8O/G8H medium borderline
Agluscaffold5862_cov1010340600 Alkaloid G8O/G8H medium borderline
Agluscaffold5862_cov1010340680 Alkaloid G8O/G8H medium borderline
Agluscaffold5862_cov1010340690 Alkaloid G8O/G8H medium borderline
Agluscaffold5862_cov1010340770 Alkaloid G8O/G8H low borderline
Agluscaffold6386_cov940356730 Alkaloid G8O/G8H medium borderline
Agluscaffold6386_cov940356750 Alkaloid G8O/G8H medium borderline
Agluscaffold80900_cov1000396510 Alkaloid G8O/G8H medium borderline
Agluscaffold8609_cov990407840 Alkaloid G8O/G8H medium borderline
Agluscaffold90477_cov1040416500 Alkaloid G8O/G8H medium borderline
Agluscaffold92815_cov1010421060 Alkaloid G8O/G8H medium borderline
Agluscaffold9741_cov910427710 Alkaloid G8O/G8H medium borderline