PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Agluscaffold1078_cov970015840 Flavonoid 4CL medium pass
Agluscaffold11162_cov920020900 Flavonoid 4CL low borderline
Agluscaffold11656_cov1050026830 Flavonoid 4CL medium pass
Agluscaffold124360_cov1070037440 Flavonoid 4CL low borderline
Agluscaffold124360_cov1070037450 Flavonoid 4CL medium pass
Agluscaffold1251_cov1000038310 Flavonoid 4CL medium pass
Agluscaffold12995_cov1030045010 Flavonoid 4CL medium pass
Agluscaffold14475_cov1060062680 Flavonoid 4CL medium pass
Agluscaffold14811_cov1090067780 Flavonoid 4CL medium pass
Agluscaffold14907_cov1050068740 Flavonoid 4CL medium pass
Agluscaffold14928_cov1050068990 Flavonoid 4CL medium pass
Agluscaffold150199_cov980069690 Flavonoid 4CL medium pass
Agluscaffold169461_cov1070089000 Flavonoid 4CL medium pass
Agluscaffold17727_cov800097090 Flavonoid 4CL low borderline
Agluscaffold19263_cov960110180 Flavonoid 4CL medium pass
Agluscaffold19488_cov1050112560 Flavonoid 4CL low borderline
Agluscaffold2219_cov990135190 Flavonoid 4CL medium pass
Agluscaffold3033_cov1010183290 Flavonoid 4CL low borderline
Agluscaffold3033_cov1010183300 Flavonoid 4CL low borderline
Agluscaffold33399_cov960200950 Flavonoid 4CL medium pass
Agluscaffold35240_cov900210790 Flavonoid 4CL medium pass
Agluscaffold35240_cov900210800 Flavonoid 4CL low borderline
Agluscaffold41143_cov1070235390 Flavonoid 4CL low borderline
Agluscaffold424421_cov990245560 Flavonoid 4CL low borderline
Agluscaffold424798_cov1090262240 Flavonoid 4CL medium pass
Agluscaffold425597_cov1050272440 Flavonoid 4CL low borderline
Agluscaffold4702_cov890298770 Flavonoid 4CL low borderline
Agluscaffold51559_cov1010315650 Flavonoid 4CL medium pass
Agluscaffold51846_cov1040316770 Flavonoid 4CL low borderline
Agluscaffold55195_cov1010327620 Flavonoid 4CL medium pass
Agluscaffold5680_cov1070333390 Flavonoid 4CL medium pass
Agluscaffold60096_cov1070344400 Flavonoid 4CL medium pass
Agluscaffold62584_cov960351290 Flavonoid 4CL medium pass
Agluscaffold65748_cov1080360580 Flavonoid 4CL medium pass
Agluscaffold66059_cov1080362070 Flavonoid 4CL low borderline
Agluscaffold736_cov1080380420 Flavonoid 4CL medium pass
Agluscaffold7545_cov870384750 Flavonoid 4CL medium pass
Agluscaffold7753_cov1000389110 Flavonoid 4CL low borderline
Agluscaffold840_cov900403740 Flavonoid 4CL low borderline
Agluscaffold861_cov1080407980 Flavonoid 4CL low borderline
Agluscaffold89160_cov1020414230 Flavonoid 4CL medium pass
Agluscaffold90455_cov960416420 Flavonoid 4CL medium pass
Agluscaffold100531_cov1050001120 Flavonoid ANR medium borderline
Agluscaffold11271_cov1070022590 Flavonoid ANR medium borderline
Agluscaffold13372_cov840050410 Flavonoid ANR low borderline
Agluscaffold135167_cov1010051600 Flavonoid ANR medium borderline
Agluscaffold1395_cov1040057870 Flavonoid ANR medium borderline
Agluscaffold2572_cov1060157590 Flavonoid ANR low borderline
Agluscaffold26327_cov1060160490 Flavonoid ANR medium borderline
Agluscaffold29081_cov980176470 Flavonoid ANR medium borderline