PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Agluscaffold11507_cov1050024830 Alkaloid T16H low borderline
Agluscaffold11507_cov1050024850 Alkaloid T16H medium borderline
Agluscaffold12576_cov940039290 Alkaloid T16H low borderline
Agluscaffold13313_cov910049450 Alkaloid T16H low borderline
Agluscaffold15624_cov1000074920 Alkaloid T16H medium borderline
Agluscaffold1691_cov680088700 Alkaloid T16H medium borderline
Agluscaffold1706_cov1020090620 Alkaloid T16H medium borderline
Agluscaffold17599_cov1060095210 Alkaloid T16H low borderline
Agluscaffold17652_cov1040096080 Alkaloid T16H medium borderline
Agluscaffold17652_cov1040096090 Alkaloid T16H medium borderline
Agluscaffold1886_cov1010105970 Alkaloid T16H medium borderline
Agluscaffold1886_cov1010105990 Alkaloid T16H medium borderline
Agluscaffold2061_cov620123830 Alkaloid T16H medium borderline
Agluscaffold20806_cov1030124860 Alkaloid T16H medium borderline
Agluscaffold2183_cov860132450 Alkaloid T16H medium borderline
Agluscaffold219777_cov960133270 Alkaloid T16H medium borderline
Agluscaffold23053_cov900142840 Alkaloid T16H medium borderline
Agluscaffold2311_cov840143120 Alkaloid T16H medium borderline
Agluscaffold2609_cov800159810 Alkaloid T16H medium borderline
Agluscaffold27709_cov840167610 Alkaloid T16H medium borderline
Agluscaffold27727_cov860167950 Alkaloid T16H medium borderline
Agluscaffold31849_cov990191450 Alkaloid T16H low borderline
Agluscaffold31849_cov990191460 Alkaloid T16H low borderline
Agluscaffold33048_cov830198110 Alkaloid T16H medium borderline
Agluscaffold34126_cov1110204070 Alkaloid T16H medium borderline
Agluscaffold37560_cov630221220 Alkaloid T16H low borderline
Agluscaffold37560_cov630221240 Alkaloid T16H low borderline
Agluscaffold39010_cov1020226310 Alkaloid T16H low borderline
Agluscaffold39649_cov530229010 Alkaloid T16H medium borderline
Agluscaffold4143_cov670238420 Alkaloid T16H medium borderline
Agluscaffold424978_cov550264250 Alkaloid T16H medium borderline
Agluscaffold42853_cov1040281600 Alkaloid T16H low borderline
Agluscaffold46329_cov1090295440 Alkaloid T16H medium borderline
Agluscaffold4795_cov940301980 Alkaloid T16H medium borderline
Agluscaffold4795_cov940302100 Alkaloid T16H medium borderline
Agluscaffold487_cov1040305810 Alkaloid T16H medium borderline
Agluscaffold5326_cov650320900 Alkaloid T16H medium borderline
Agluscaffold5326_cov650320930 Alkaloid T16H medium borderline
Agluscaffold54187_cov950325180 Alkaloid T16H medium borderline
Agluscaffold5779_cov1020336660 Alkaloid T16H medium borderline
Agluscaffold5779_cov1020336670 Alkaloid T16H medium borderline
Agluscaffold5862_cov1010340610 Alkaloid T16H medium borderline
Agluscaffold5862_cov1010340630 Alkaloid T16H medium borderline
Agluscaffold5862_cov1010340650 Alkaloid T16H medium borderline
Agluscaffold5862_cov1010340660 Alkaloid T16H medium borderline
Agluscaffold5862_cov1010340780 Alkaloid T16H medium pass
Agluscaffold6029_cov890344520 Alkaloid T16H low borderline
Agluscaffold6386_cov940356760 Alkaloid T16H low borderline
Agluscaffold6629_cov1000363230 Alkaloid T16H medium borderline
Agluscaffold6843_cov1070368110 Alkaloid T16H medium borderline