PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Agluscaffold23635_cov1040146000 Terpenoid AACT medium borderline
Agluscaffold24662_cov1010150720 Terpenoid AACT low borderline
Agluscaffold36889_cov1010218520 Terpenoid AACT low borderline
Agluscaffold4207_cov990241770 Terpenoid AACT medium borderline
Agluscaffold424677_cov1040257650 Terpenoid AACT medium borderline
Agluscaffold5004_cov950310980 Terpenoid AACT medium borderline
Agluscaffold61781_cov890349160 Terpenoid AACT low borderline
Agluscaffold66976_cov900364880 Terpenoid AACT medium borderline
Agluscaffold10247_cov1030004450 Terpenoid BAHD medium pass
Agluscaffold10265_cov930004680 Terpenoid BAHD low borderline
Agluscaffold10434_cov950009670 Terpenoid BAHD medium pass
Agluscaffold10768_cov1070014980 Terpenoid BAHD medium pass
Agluscaffold10768_cov1070014990 Terpenoid BAHD medium pass
Agluscaffold10869_cov950016860 Terpenoid BAHD low borderline
Agluscaffold10869_cov950016870 Terpenoid BAHD medium pass
Agluscaffold1086_cov1000016970 Terpenoid BAHD medium pass
Agluscaffold1103_cov1010018710 Terpenoid BAHD low borderline
Agluscaffold1132_cov1020023070 Terpenoid BAHD low borderline
Agluscaffold1132_cov1020023080 Terpenoid BAHD medium pass
Agluscaffold1132_cov1020023090 Terpenoid BAHD medium pass
Agluscaffold11361_cov1080023500 Terpenoid BAHD medium pass
Agluscaffold11456_cov890024180 Terpenoid BAHD medium pass
Agluscaffold11727_cov790028740 Terpenoid BAHD medium pass
Agluscaffold11786_cov1090030600 Terpenoid BAHD medium pass
Agluscaffold121436_cov950033570 Terpenoid BAHD medium pass
Agluscaffold1234_cov1010036710 Terpenoid BAHD medium pass
Agluscaffold12576_cov940039080 Terpenoid BAHD low borderline
Agluscaffold12576_cov940039100 Terpenoid BAHD medium pass
Agluscaffold12576_cov940039130 Terpenoid BAHD medium pass
Agluscaffold12576_cov940039140 Terpenoid BAHD low borderline
Agluscaffold12576_cov940039160 Terpenoid BAHD medium pass
Agluscaffold12813_cov1070042280 Terpenoid BAHD medium pass
Agluscaffold12813_cov1070042290 Terpenoid BAHD medium pass
Agluscaffold12813_cov1070042300 Terpenoid BAHD low borderline
Agluscaffold12995_cov1030045090 Terpenoid BAHD medium pass
Agluscaffold133537_cov1060050180 Terpenoid BAHD medium pass
Agluscaffold13579_cov1080052600 Terpenoid BAHD low borderline
Agluscaffold13579_cov1080052610 Terpenoid BAHD medium pass
Agluscaffold13641_cov890054690 Terpenoid BAHD medium pass
Agluscaffold13641_cov890054710 Terpenoid BAHD medium pass
Agluscaffold13641_cov890054720 Terpenoid BAHD low borderline
Agluscaffold13809_cov1020056110 Terpenoid BAHD medium pass
Agluscaffold14039_cov730058810 Terpenoid BAHD low borderline
Agluscaffold14070_cov1040059170 Terpenoid BAHD medium pass
Agluscaffold140824_cov1100059650 Terpenoid BAHD medium pass
Agluscaffold14422_cov850062060 Terpenoid BAHD medium pass
Agluscaffold14422_cov850062070 Terpenoid BAHD medium pass
Agluscaffold1446_cov980062610 Terpenoid BAHD low borderline
Agluscaffold14558_cov1040063460 Terpenoid BAHD medium pass
Agluscaffold14558_cov1040063470 Terpenoid BAHD medium pass