PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COMT
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Gene Pathway Family Confidence Status
Agluscaffold11125_cov980020380 Phenylpropanoid COMT medium pass
Agluscaffold12934_cov1060043820 Phenylpropanoid COMT low borderline
Agluscaffold1703_cov1070090340 Phenylpropanoid COMT medium pass
Agluscaffold174522_cov1120093370 Phenylpropanoid COMT low borderline
Agluscaffold179917_cov770098360 Phenylpropanoid COMT medium pass
Agluscaffold18205_cov1080100440 Phenylpropanoid COMT medium pass
Agluscaffold18205_cov1080100450 Phenylpropanoid COMT medium pass
Agluscaffold19437_cov970112250 Phenylpropanoid COMT low borderline
Agluscaffold19437_cov970112270 Phenylpropanoid COMT medium pass
Agluscaffold19437_cov970112290 Phenylpropanoid COMT medium pass
Agluscaffold2158_cov1080130440 Phenylpropanoid COMT medium pass
Agluscaffold24626_cov920150490 Phenylpropanoid COMT medium pass
Agluscaffold26725_cov760162620 Phenylpropanoid COMT low borderline
Agluscaffold30045_cov1060180840 Phenylpropanoid COMT medium pass
Agluscaffold35196_cov1080210410 Phenylpropanoid COMT low borderline
Agluscaffold4025_cov1070231770 Phenylpropanoid COMT medium pass
Agluscaffold41830_cov950240500 Phenylpropanoid COMT medium pass
Agluscaffold427260_cov1060279460 Phenylpropanoid COMT medium pass
Agluscaffold427260_cov1060279520 Phenylpropanoid COMT medium pass
Agluscaffold431_cov930283290 Phenylpropanoid COMT low borderline
Agluscaffold49040_cov1110306980 Phenylpropanoid COMT low borderline
Agluscaffold5023_cov990312080 Phenylpropanoid COMT low borderline
Agluscaffold5969_cov910343190 Phenylpropanoid COMT low borderline
Agluscaffold6377_cov1060356440 Phenylpropanoid COMT low borderline
Agluscaffold6377_cov1060356460 Phenylpropanoid COMT medium pass
Agluscaffold65055_cov1010359400 Phenylpropanoid COMT medium pass
Agluscaffold67654_cov980366440 Phenylpropanoid COMT medium pass
Agluscaffold67654_cov980366460 Phenylpropanoid COMT medium pass
Agluscaffold67654_cov980366470 Phenylpropanoid COMT medium pass
Agluscaffold814_cov950399000 Phenylpropanoid COMT low borderline