PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
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Gene Pathway Family Confidence Status
Agluscaffold12576_cov940039260 Flavonoid FNS medium borderline
Agluscaffold12576_cov940039270 Flavonoid FNS medium borderline
Agluscaffold13313_cov910049450 Flavonoid FNS medium borderline
Agluscaffold1691_cov680088700 Flavonoid FNS medium borderline
Agluscaffold1706_cov1020090620 Flavonoid FNS medium borderline
Agluscaffold17652_cov1040096080 Flavonoid FNS medium borderline
Agluscaffold17652_cov1040096090 Flavonoid FNS medium borderline
Agluscaffold19223_cov1070109280 Flavonoid FNS low borderline
Agluscaffold19262_cov910110170 Flavonoid FNS medium borderline
Agluscaffold20621_cov980123860 Flavonoid FNS medium borderline
Agluscaffold20806_cov1030124860 Flavonoid FNS medium borderline
Agluscaffold22822_cov860141560 Flavonoid FNS medium borderline
Agluscaffold2311_cov840143130 Flavonoid FNS medium borderline
Agluscaffold24056_cov700147950 Flavonoid FNS medium borderline
Agluscaffold2582_cov990158220 Flavonoid FNS medium borderline
Agluscaffold27727_cov860167950 Flavonoid FNS medium borderline
Agluscaffold28679_cov1060173880 Flavonoid FNS medium borderline
Agluscaffold2961_cov870178920 Flavonoid FNS medium borderline
Agluscaffold34126_cov1110204020 Flavonoid FNS medium borderline
Agluscaffold34126_cov1110204070 Flavonoid FNS medium borderline
Agluscaffold3931_cov1060227770 Flavonoid FNS low borderline
Agluscaffold4125_cov980236340 Flavonoid FNS medium borderline
Agluscaffold424545_cov1020251400 Flavonoid FNS medium borderline
Agluscaffold424620_cov970255080 Flavonoid FNS medium borderline
Agluscaffold4795_cov940301980 Flavonoid FNS medium borderline
Agluscaffold4795_cov940302140 Flavonoid FNS medium borderline
Agluscaffold5014_cov1070311600 Flavonoid FNS low borderline
Agluscaffold5326_cov650320930 Flavonoid FNS medium borderline
Agluscaffold5802_cov950337180 Flavonoid FNS medium borderline
Agluscaffold5802_cov950337190 Flavonoid FNS medium borderline
Agluscaffold5862_cov1010340770 Flavonoid FNS medium borderline
Agluscaffold8507_cov890406160 Flavonoid FNS medium borderline