PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Agluscaffold425357_cov1030266810 Flavonoid ANR medium borderline
Agluscaffold425579_cov1090271300 Flavonoid ANR medium borderline
Agluscaffold47134_cov820299060 Flavonoid ANR medium borderline
Agluscaffold5072_cov1050313560 Flavonoid ANR low borderline
Agluscaffold5362_cov990323250 Flavonoid ANR medium borderline
Agluscaffold59889_cov1040343480 Flavonoid ANR medium borderline
Agluscaffold65925_cov1050361620 Flavonoid ANR low borderline
Agluscaffold75864_cov960385390 Flavonoid ANR medium borderline
Agluscaffold75864_cov960385400 Flavonoid ANR medium borderline
Agluscaffold76602_cov1050386580 Flavonoid ANR medium borderline
Agluscaffold7771_cov1070389890 Flavonoid ANR low borderline
Agluscaffold108013_cov960015870 Flavonoid ANS/LDOX low borderline
Agluscaffold11786_cov1090030430 Flavonoid ANS/LDOX low borderline
Agluscaffold13294_cov970049050 Flavonoid ANS/LDOX medium borderline
Agluscaffold13294_cov970049060 Flavonoid ANS/LDOX medium borderline
Agluscaffold16964_cov980089310 Flavonoid ANS/LDOX medium borderline
Agluscaffold193270_cov990111120 Flavonoid ANS/LDOX medium borderline
Agluscaffold193270_cov990111130 Flavonoid ANS/LDOX medium borderline
Agluscaffold19434_cov1020111920 Flavonoid ANS/LDOX low borderline
Agluscaffold27709_cov840167680 Flavonoid ANS/LDOX medium borderline
Agluscaffold2942_cov1030178480 Flavonoid ANS/LDOX medium borderline
Agluscaffold3389_cov1010202560 Flavonoid ANS/LDOX medium borderline
Agluscaffold34357_cov1060205710 Flavonoid ANS/LDOX medium borderline
Agluscaffold425353_cov1010266610 Flavonoid ANS/LDOX medium borderline
Agluscaffold434_cov1070284330 Flavonoid ANS/LDOX medium borderline
Agluscaffold5330_cov1060321340 Flavonoid ANS/LDOX low borderline
Agluscaffold5541_cov870327860 Flavonoid ANS/LDOX medium pass
Agluscaffold9221_cov1030419860 Flavonoid ANS/LDOX low borderline
Agluscaffold15624_cov1000074920 Flavonoid C4H medium borderline
Agluscaffold18614_cov820103950 Flavonoid C4H low borderline
Agluscaffold24662_cov1010150720 Flavonoid C4H medium borderline
Agluscaffold25350_cov920155320 Flavonoid C4H low borderline
Agluscaffold424613_cov1090254250 Flavonoid C4H low borderline
Agluscaffold4581_cov930292290 Flavonoid C4H low borderline
Agluscaffold56595_cov960333080 Flavonoid C4H medium borderline
Agluscaffold62963_cov1050353600 Flavonoid C4H low borderline
Agluscaffold62963_cov1050353610 Flavonoid C4H low borderline
Agluscaffold424689_cov870258050 Flavonoid CHI medium pass
Agluscaffold424749_cov1020260520 Flavonoid CHI medium pass
Agluscaffold425630_cov770273090 Flavonoid CHI medium pass
Agluscaffold427260_cov1060279310 Flavonoid CHI medium pass
Agluscaffold48114_cov1100302980 Flavonoid CHI medium pass
Agluscaffold12267_cov1020034950 Flavonoid CHS medium pass
Agluscaffold15381_cov1030073040 Flavonoid CHS medium pass
Agluscaffold15381_cov1030073050 Flavonoid CHS medium pass
Agluscaffold424506_cov1080249070 Flavonoid CHS medium pass
Agluscaffold66976_cov900364850 Flavonoid CHS medium pass
Agluscaffold73714_cov1030380490 Flavonoid CHS medium pass
Agluscaffold1163_cov990026310 Flavonoid DFR medium borderline
Agluscaffold130347_cov1050046170 Flavonoid DFR medium borderline