PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
Agluscaffold41647_cov1020239480 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold424463_cov1080247650 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold424730_cov970258870 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold424749_cov1020260540 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold424749_cov1020260560 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold424889_cov1050263550 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold425025_cov960264700 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold45751_cov970291780 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold4581_cov930292290 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold46329_cov1090295450 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold53_cov990324730 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold5594_cov910330620 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold5802_cov950337220 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold5802_cov950337230 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold5802_cov950337240 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold5802_cov950337250 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold5802_cov950337320 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold5802_cov950337330 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold58258_cov1050338850 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold585_cov910340330 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold61560_cov1020348650 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold6193_cov1040349590 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold6386_cov940356730 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold6386_cov940356750 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold65826_cov880360880 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold6608_cov950362510 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold66964_cov1060364570 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold6711_cov900365250 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold69971_cov1050370600 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold70885_cov900372910 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold78712_cov930392780 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold78712_cov930392790 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold78712_cov930392800 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold78712_cov930392830 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold78712_cov930392870 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold7935_cov790393880 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold9041_cov1050416200 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold98410_cov870428760 Steroid BR6OX2/CYP85A2 low borderline