PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
Agluscaffold10175_cov800002970 Alkaloid CODM/T6ODM medium borderline
Agluscaffold10588_cov1100012230 Alkaloid CODM/T6ODM medium borderline
Agluscaffold10833_cov1010016180 Alkaloid CODM/T6ODM medium borderline
Agluscaffold11361_cov1080023380 Alkaloid CODM/T6ODM medium borderline
Agluscaffold12589_cov910039590 Alkaloid CODM/T6ODM medium borderline
Agluscaffold129623_cov1020044330 Alkaloid CODM/T6ODM medium borderline
Agluscaffold13294_cov970049050 Alkaloid CODM/T6ODM medium borderline
Agluscaffold13294_cov970049060 Alkaloid CODM/T6ODM low borderline
Agluscaffold13530_cov920051680 Alkaloid CODM/T6ODM medium borderline
Agluscaffold137975_cov920055980 Alkaloid CODM/T6ODM medium borderline
Agluscaffold15210_cov1070071680 Alkaloid CODM/T6ODM medium borderline
Agluscaffold16964_cov980089310 Alkaloid CODM/T6ODM medium borderline
Agluscaffold17817_cov900097830 Alkaloid CODM/T6ODM medium borderline
Agluscaffold1814_cov810099820 Alkaloid CODM/T6ODM medium borderline
Agluscaffold193270_cov990111110 Alkaloid CODM/T6ODM medium borderline
Agluscaffold193270_cov990111120 Alkaloid CODM/T6ODM medium borderline
Agluscaffold193270_cov990111130 Alkaloid CODM/T6ODM medium borderline
Agluscaffold1946_cov1050112530 Alkaloid CODM/T6ODM medium borderline
Agluscaffold20049_cov1000118110 Alkaloid CODM/T6ODM medium borderline
Agluscaffold20079_cov980118460 Alkaloid CODM/T6ODM medium borderline
Agluscaffold20079_cov980118610 Alkaloid CODM/T6ODM medium borderline
Agluscaffold20137_cov1040119810 Alkaloid CODM/T6ODM medium borderline
Agluscaffold21574_cov1060129930 Alkaloid CODM/T6ODM medium borderline
Agluscaffold25094_cov1050153890 Alkaloid CODM/T6ODM medium borderline
Agluscaffold25094_cov1050153900 Alkaloid CODM/T6ODM medium borderline
Agluscaffold27709_cov840167680 Alkaloid CODM/T6ODM medium borderline
Agluscaffold2942_cov1030178480 Alkaloid CODM/T6ODM medium borderline
Agluscaffold3169_cov980190100 Alkaloid CODM/T6ODM medium borderline
Agluscaffold3389_cov1010202530 Alkaloid CODM/T6ODM medium borderline
Agluscaffold3389_cov1010202540 Alkaloid CODM/T6ODM medium borderline
Agluscaffold3389_cov1010202560 Alkaloid CODM/T6ODM medium borderline
Agluscaffold3389_cov1010202570 Alkaloid CODM/T6ODM medium borderline
Agluscaffold34357_cov1060205650 Alkaloid CODM/T6ODM medium borderline
Agluscaffold34357_cov1060205710 Alkaloid CODM/T6ODM medium borderline
Agluscaffold38979_cov880226240 Alkaloid CODM/T6ODM medium borderline
Agluscaffold38979_cov880226250 Alkaloid CODM/T6ODM medium borderline
Agluscaffold3913_cov1050226960 Alkaloid CODM/T6ODM medium borderline
Agluscaffold424549_cov860251470 Alkaloid CODM/T6ODM medium borderline
Agluscaffold424613_cov1090254290 Alkaloid CODM/T6ODM medium borderline
Agluscaffold424778_cov990261590 Alkaloid CODM/T6ODM medium borderline
Agluscaffold424801_cov940262470 Alkaloid CODM/T6ODM medium borderline
Agluscaffold425353_cov1010266600 Alkaloid CODM/T6ODM medium borderline
Agluscaffold425964_cov1040276230 Alkaloid CODM/T6ODM medium borderline
Agluscaffold425964_cov1040276240 Alkaloid CODM/T6ODM medium borderline
Agluscaffold4625_cov930294950 Alkaloid CODM/T6ODM medium borderline
Agluscaffold49267_cov1090307450 Alkaloid CODM/T6ODM medium borderline
Agluscaffold52807_cov890319210 Alkaloid CODM/T6ODM medium borderline
Agluscaffold5362_cov990323280 Alkaloid CODM/T6ODM low borderline
Agluscaffold5541_cov870327850 Alkaloid CODM/T6ODM medium borderline
Agluscaffold5541_cov870327860 Alkaloid CODM/T6ODM medium borderline