PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Agluscaffold37560_cov630221240 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold37622_cov1040221420 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold37842_cov1120222170 Steroid DWF4/CYP90B1 low borderline
Agluscaffold38527_cov1060224690 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold4109_cov850235010 Steroid DWF4/CYP90B1 low borderline
Agluscaffold4118_cov1000235930 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold4125_cov980236340 Steroid DWF4/CYP90B1 low borderline
Agluscaffold41647_cov1020239510 Steroid DWF4/CYP90B1 low borderline
Agluscaffold41647_cov1020239520 Steroid DWF4/CYP90B1 low borderline
Agluscaffold424409_cov1070244760 Steroid DWF4/CYP90B1 low borderline
Agluscaffold424603_cov920254070 Steroid DWF4/CYP90B1 low borderline
Agluscaffold424620_cov970255080 Steroid DWF4/CYP90B1 low borderline
Agluscaffold424978_cov550264250 Steroid DWF4/CYP90B1 low borderline
Agluscaffold425543_cov920270600 Steroid DWF4/CYP90B1 low borderline
Agluscaffold4439_cov1070287000 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold46329_cov1090295390 Steroid DWF4/CYP90B1 low borderline
Agluscaffold46329_cov1090295410 Steroid DWF4/CYP90B1 low borderline
Agluscaffold46329_cov1090295460 Steroid DWF4/CYP90B1 low borderline
Agluscaffold4795_cov940302100 Steroid DWF4/CYP90B1 low borderline
Agluscaffold4795_cov940302140 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5326_cov650320900 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5462_cov830325910 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5462_cov830325940 Steroid DWF4/CYP90B1 low borderline
Agluscaffold54664_cov980326100 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5594_cov910330590 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5594_cov910330630 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5779_cov1020336660 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5779_cov1020336670 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5802_cov950337180 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5802_cov950337190 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5862_cov1010340600 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5862_cov1010340610 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5862_cov1010340680 Steroid DWF4/CYP90B1 low borderline
Agluscaffold5862_cov1010340750 Steroid DWF4/CYP90B1 low borderline
Agluscaffold60713_cov1040346020 Steroid DWF4/CYP90B1 low borderline
Agluscaffold60713_cov1040346070 Steroid DWF4/CYP90B1 low borderline
Agluscaffold6386_cov940356760 Steroid DWF4/CYP90B1 low borderline
Agluscaffold65826_cov880360850 Steroid DWF4/CYP90B1 low borderline
Agluscaffold65826_cov880360870 Steroid DWF4/CYP90B1 low borderline
Agluscaffold6629_cov1000363230 Steroid DWF4/CYP90B1 low borderline
Agluscaffold6843_cov1070368110 Steroid DWF4/CYP90B1 low borderline
Agluscaffold6843_cov1070368170 Steroid DWF4/CYP90B1 low borderline
Agluscaffold6905_cov1080369170 Steroid DWF4/CYP90B1 low borderline
Agluscaffold7698_cov720387800 Steroid DWF4/CYP90B1 low borderline
Agluscaffold78712_cov930392750 Steroid DWF4/CYP90B1 low borderline
Agluscaffold78712_cov930392840 Steroid DWF4/CYP90B1 low borderline
Agluscaffold793_cov1030394040 Steroid DWF4/CYP90B1 medium borderline
Agluscaffold80900_cov1000396650 Steroid DWF4/CYP90B1 low borderline
Agluscaffold8236_cov900400460 Steroid DWF4/CYP90B1 low borderline
Agluscaffold8236_cov900400470 Steroid DWF4/CYP90B1 low borderline