PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Agluscaffold38979_cov880226250 Flavonoid F3H medium borderline
Agluscaffold3913_cov1050226960 Flavonoid F3H medium borderline
Agluscaffold40592_cov910233150 Flavonoid F3H medium borderline
Agluscaffold424549_cov860251470 Flavonoid F3H medium borderline
Agluscaffold424613_cov1090254290 Flavonoid F3H medium borderline
Agluscaffold424623_cov1010255240 Flavonoid F3H medium borderline
Agluscaffold424623_cov1010255250 Flavonoid F3H medium borderline
Agluscaffold424778_cov990261590 Flavonoid F3H medium borderline
Agluscaffold424801_cov940262470 Flavonoid F3H medium borderline
Agluscaffold425353_cov1010266600 Flavonoid F3H medium pass
Agluscaffold425964_cov1040276230 Flavonoid F3H medium borderline
Agluscaffold425964_cov1040276240 Flavonoid F3H medium borderline
Agluscaffold43710_cov1090284970 Flavonoid F3H low borderline
Agluscaffold4625_cov930294950 Flavonoid F3H medium borderline
Agluscaffold49267_cov1090307450 Flavonoid F3H medium borderline
Agluscaffold52807_cov890319210 Flavonoid F3H medium borderline
Agluscaffold5541_cov870327850 Flavonoid F3H medium borderline
Agluscaffold5761_cov1020336190 Flavonoid F3H medium borderline
Agluscaffold6000_cov990344180 Flavonoid F3H medium borderline
Agluscaffold6377_cov1060356470 Flavonoid F3H medium borderline
Agluscaffold67245_cov660365510 Flavonoid F3H medium borderline
Agluscaffold7026_cov990371110 Flavonoid F3H medium borderline
Agluscaffold7026_cov990371150 Flavonoid F3H medium borderline
Agluscaffold7026_cov990371170 Flavonoid F3H medium borderline
Agluscaffold7026_cov990371190 Flavonoid F3H medium borderline
Agluscaffold7026_cov990371210 Flavonoid F3H medium borderline
Agluscaffold7278_cov1020376890 Flavonoid F3H low borderline
Agluscaffold7384_cov1020381530 Flavonoid F3H medium borderline
Agluscaffold751_cov1050383890 Flavonoid F3H medium borderline
Agluscaffold7795_cov1030390870 Flavonoid F3H medium borderline
Agluscaffold79508_cov1040394220 Flavonoid F3H medium borderline
Agluscaffold814_cov950399020 Flavonoid F3H medium borderline
Agluscaffold8556_cov1070406670 Flavonoid F3H low borderline
Agluscaffold882_cov1020413220 Flavonoid F3H low borderline
Agluscaffold882_cov1020413230 Flavonoid F3H low borderline
Agluscaffold907_cov990416920 Flavonoid F3H medium pass
Agluscaffold92815_cov1010420780 Flavonoid F3H medium borderline