PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Agluscaffold10381_cov1020007040 Alkaloid T3O low borderline
Agluscaffold10381_cov1020007050 Alkaloid T3O low borderline
Agluscaffold10445_cov860009770 Alkaloid T3O medium borderline
Agluscaffold10445_cov860009820 Alkaloid T3O medium borderline
Agluscaffold105568_cov1050011970 Alkaloid T3O medium borderline
Agluscaffold11115_cov960020110 Alkaloid T3O low borderline
Agluscaffold11361_cov1080023390 Alkaloid T3O medium pass
Agluscaffold11507_cov1050024810 Alkaloid T3O medium borderline
Agluscaffold11507_cov1050024820 Alkaloid T3O medium pass
Agluscaffold11507_cov1050024860 Alkaloid T3O medium borderline
Agluscaffold11817_cov970030730 Alkaloid T3O low borderline
Agluscaffold121800_cov990034010 Alkaloid T3O low borderline
Agluscaffold12380_cov1080037180 Alkaloid T3O medium borderline
Agluscaffold12576_cov940039260 Alkaloid T3O medium borderline
Agluscaffold13340_cov1000049870 Alkaloid T3O medium borderline
Agluscaffold13340_cov1000049900 Alkaloid T3O medium borderline
Agluscaffold13506_cov1020051090 Alkaloid T3O medium borderline
Agluscaffold13530_cov920051690 Alkaloid T3O medium pass
Agluscaffold13530_cov920051700 Alkaloid T3O low borderline
Agluscaffold13530_cov920051710 Alkaloid T3O medium borderline
Agluscaffold1359_cov950053730 Alkaloid T3O medium pass
Agluscaffold15599_cov830074670 Alkaloid T3O medium pass
Agluscaffold15624_cov1000074980 Alkaloid T3O medium pass
Agluscaffold1607_cov990080550 Alkaloid T3O low borderline
Agluscaffold1607_cov990080560 Alkaloid T3O low borderline
Agluscaffold16107_cov1070080930 Alkaloid T3O medium borderline
Agluscaffold16107_cov1070080940 Alkaloid T3O medium borderline
Agluscaffold16347_cov980083780 Alkaloid T3O medium borderline
Agluscaffold16385_cov1110084190 Alkaloid T3O medium pass
Agluscaffold16386_cov1030084380 Alkaloid T3O medium pass
Agluscaffold16596_cov810086490 Alkaloid T3O low borderline
Agluscaffold1659_cov870086520 Alkaloid T3O low borderline
Agluscaffold1687_cov930088530 Alkaloid T3O medium pass
Agluscaffold1691_cov680088620 Alkaloid T3O medium borderline
Agluscaffold17652_cov1040096280 Alkaloid T3O medium borderline
Agluscaffold17652_cov1040096290 Alkaloid T3O medium borderline
Agluscaffold17652_cov1040096300 Alkaloid T3O medium borderline
Agluscaffold17652_cov1040096310 Alkaloid T3O medium borderline
Agluscaffold18766_cov960105250 Alkaloid T3O low borderline
Agluscaffold19026_cov1000106830 Alkaloid T3O medium borderline
Agluscaffold19152_cov1030108130 Alkaloid T3O low borderline
Agluscaffold19223_cov1070109060 Alkaloid T3O medium borderline
Agluscaffold20410_cov1080121700 Alkaloid T3O low borderline
Agluscaffold20613_cov1020123690 Alkaloid T3O medium borderline
Agluscaffold20621_cov980123860 Alkaloid T3O medium pass
Agluscaffold21025_cov1020126670 Alkaloid T3O medium pass
Agluscaffold21166_cov880127650 Alkaloid T3O medium borderline
Agluscaffold21477_cov1070129580 Alkaloid T3O low borderline
Agluscaffold219777_cov960133280 Alkaloid T3O medium borderline
Agluscaffold21987_cov1020133550 Alkaloid T3O low borderline