PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Agluscaffold2219_cov990135040 Alkaloid T3O low borderline
Agluscaffold2231_cov950136220 Alkaloid T3O medium borderline
Agluscaffold22822_cov860141560 Alkaloid T3O medium pass
Agluscaffold2311_cov840143160 Alkaloid T3O medium borderline
Agluscaffold23591_cov1010145040 Alkaloid T3O medium borderline
Agluscaffold24310_cov700149340 Alkaloid T3O medium borderline
Agluscaffold244_cov940150140 Alkaloid T3O medium borderline
Agluscaffold24662_cov1010150800 Alkaloid T3O low borderline
Agluscaffold24662_cov1010150830 Alkaloid T3O medium pass
Agluscaffold24961_cov1100152400 Alkaloid T3O medium pass
Agluscaffold25560_cov1040156960 Alkaloid T3O medium pass
Agluscaffold2609_cov800159780 Alkaloid T3O medium borderline
Agluscaffold2609_cov800159860 Alkaloid T3O medium borderline
Agluscaffold2609_cov800159870 Alkaloid T3O medium borderline
Agluscaffold27727_cov860167880 Alkaloid T3O medium borderline
Agluscaffold28036_cov1030169730 Alkaloid T3O low borderline
Agluscaffold28297_cov910171730 Alkaloid T3O medium borderline
Agluscaffold28336_cov900171960 Alkaloid T3O medium pass
Agluscaffold28679_cov1060173900 Alkaloid T3O medium borderline
Agluscaffold2883_cov1050175350 Alkaloid T3O low borderline
Agluscaffold2946_cov670178620 Alkaloid T3O medium pass
Agluscaffold29931_cov930180130 Alkaloid T3O medium borderline
Agluscaffold3033_cov1010183350 Alkaloid T3O low borderline
Agluscaffold3033_cov1010183360 Alkaloid T3O low borderline
Agluscaffold31726_cov960190220 Alkaloid T3O medium borderline
Agluscaffold34427_cov890205800 Alkaloid T3O medium borderline
Agluscaffold3495_cov810209440 Alkaloid T3O medium borderline
Agluscaffold35802_cov1000213860 Alkaloid T3O medium borderline
Agluscaffold36022_cov1000215000 Alkaloid T3O medium borderline
Agluscaffold36022_cov1000215010 Alkaloid T3O medium borderline
Agluscaffold36147_cov1000215090 Alkaloid T3O low borderline
Agluscaffold36291_cov1020215730 Alkaloid T3O medium pass
Agluscaffold37842_cov1120222170 Alkaloid T3O medium borderline
Agluscaffold38527_cov1060224690 Alkaloid T3O medium pass
Agluscaffold3913_cov1050226810 Alkaloid T3O medium pass
Agluscaffold4109_cov850235010 Alkaloid T3O medium borderline
Agluscaffold4118_cov1000235930 Alkaloid T3O medium pass
Agluscaffold4125_cov980236340 Alkaloid T3O low borderline
Agluscaffold4143_cov670238450 Alkaloid T3O medium borderline
Agluscaffold41647_cov1020239470 Alkaloid T3O medium borderline
Agluscaffold41647_cov1020239480 Alkaloid T3O medium borderline
Agluscaffold41647_cov1020239510 Alkaloid T3O medium borderline
Agluscaffold41647_cov1020239520 Alkaloid T3O medium borderline
Agluscaffold424463_cov1080247650 Alkaloid T3O medium pass
Agluscaffold424484_cov980248580 Alkaloid T3O medium borderline
Agluscaffold424603_cov920254070 Alkaloid T3O medium borderline
Agluscaffold424730_cov970258870 Alkaloid T3O medium borderline
Agluscaffold424749_cov1020260540 Alkaloid T3O low borderline
Agluscaffold424755_cov1020260790 Alkaloid T3O low borderline
Agluscaffold425025_cov960264700 Alkaloid T3O medium borderline