PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Agluscaffold425108_cov940265170 Alkaloid T3O medium borderline
Agluscaffold425593_cov950272010 Alkaloid T3O medium pass
Agluscaffold42569_cov1020274490 Alkaloid T3O medium borderline
Agluscaffold42569_cov1020274510 Alkaloid T3O medium borderline
Agluscaffold425760_cov950274820 Alkaloid T3O medium pass
Agluscaffold426507_cov990277320 Alkaloid T3O medium pass
Agluscaffold427956_cov730281030 Alkaloid T3O medium borderline
Agluscaffold4439_cov1070287000 Alkaloid T3O medium pass
Agluscaffold4556_cov1050290630 Alkaloid T3O medium borderline
Agluscaffold4556_cov1050290670 Alkaloid T3O medium borderline
Agluscaffold46329_cov1090295390 Alkaloid T3O medium borderline
Agluscaffold46329_cov1090295410 Alkaloid T3O medium borderline
Agluscaffold46329_cov1090295460 Alkaloid T3O medium borderline
Agluscaffold4795_cov940302140 Alkaloid T3O medium borderline
Agluscaffold48160_cov770303140 Alkaloid T3O medium pass
Agluscaffold5055_cov1010312970 Alkaloid T3O medium pass
Agluscaffold5462_cov830325910 Alkaloid T3O medium borderline
Agluscaffold5462_cov830325920 Alkaloid T3O medium borderline
Agluscaffold5462_cov830325940 Alkaloid T3O medium borderline
Agluscaffold54664_cov980326100 Alkaloid T3O low borderline
Agluscaffold5594_cov910330590 Alkaloid T3O medium borderline
Agluscaffold5594_cov910330620 Alkaloid T3O medium borderline
Agluscaffold5594_cov910330630 Alkaloid T3O medium borderline
Agluscaffold5802_cov950337200 Alkaloid T3O medium borderline
Agluscaffold5802_cov950337210 Alkaloid T3O medium borderline
Agluscaffold5802_cov950337220 Alkaloid T3O medium borderline
Agluscaffold5802_cov950337230 Alkaloid T3O medium borderline
Agluscaffold5802_cov950337320 Alkaloid T3O medium borderline
Agluscaffold5802_cov950337330 Alkaloid T3O medium borderline
Agluscaffold58258_cov1050338850 Alkaloid T3O low borderline
Agluscaffold5838_cov1040339450 Alkaloid T3O medium borderline
Agluscaffold585_cov910340230 Alkaloid T3O low borderline
Agluscaffold585_cov910340330 Alkaloid T3O low borderline
Agluscaffold5862_cov1010340750 Alkaloid T3O medium borderline
Agluscaffold6193_cov1040349590 Alkaloid T3O medium borderline
Agluscaffold62963_cov1050353600 Alkaloid T3O medium pass
Agluscaffold62963_cov1050353610 Alkaloid T3O medium pass
Agluscaffold65826_cov880360850 Alkaloid T3O medium borderline
Agluscaffold65826_cov880360870 Alkaloid T3O medium borderline
Agluscaffold65826_cov880360880 Alkaloid T3O medium borderline
Agluscaffold6608_cov950362510 Alkaloid T3O low borderline
Agluscaffold6843_cov1070368170 Alkaloid T3O medium borderline
Agluscaffold69971_cov1050370590 Alkaloid T3O low borderline
Agluscaffold69971_cov1050370600 Alkaloid T3O medium borderline
Agluscaffold7295_cov920377890 Alkaloid T3O medium borderline
Agluscaffold80900_cov1000396650 Alkaloid T3O low borderline
Agluscaffold8236_cov900400460 Alkaloid T3O medium pass
Agluscaffold8236_cov900400470 Alkaloid T3O medium pass
Agluscaffold8236_cov900400490 Alkaloid T3O medium pass
Agluscaffold84568_cov1000404580 Alkaloid T3O medium borderline