PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Agluscaffold10445_cov860009770 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold11361_cov1080023390 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold12576_cov940039330 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold19152_cov1030108130 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold21025_cov1020126670 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold24961_cov1100152400 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold25169_cov1040154170 Steroid BR6OX1/CYP85A1 low borderline
Agluscaffold2582_cov990158220 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold2609_cov800159810 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold2609_cov800159860 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold3152_cov740188980 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold36291_cov1020215730 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold424731_cov1030259070 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold425760_cov950274820 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold427956_cov730281030 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold56595_cov960333080 Steroid BR6OX1/CYP85A1 low borderline
Agluscaffold5838_cov1040339450 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold8175_cov890399510 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold855_cov990406920 Steroid BR6OX1/CYP85A1 medium borderline
Agluscaffold10043_cov1470000960 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold105568_cov1050011970 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold10937_cov680017630 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold11115_cov960020110 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold11507_cov1050024820 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold11730_cov1060029360 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold11730_cov1060029370 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold12576_cov940039260 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold12576_cov940039270 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold13233_cov970048080 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold13233_cov970048090 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold1359_cov950053730 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold15624_cov1000074920 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold16386_cov1030084380 Steroid BR6OX2/CYP85A2 medium borderline
Agluscaffold1659_cov870086520 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold1691_cov680088570 Steroid BR6OX2/CYP85A2 medium pass
Agluscaffold1691_cov680088620 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold1691_cov680088640 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold17652_cov1040096080 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold17652_cov1040096090 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold18766_cov960105250 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold18776_cov730105430 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold19263_cov960110190 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold19437_cov970112130 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold20335_cov980121030 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold20613_cov1020123610 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold219777_cov960133280 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold21987_cov1020133550 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold2219_cov990135050 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold2311_cov840143100 Steroid BR6OX2/CYP85A2 low borderline
Agluscaffold2311_cov840143130 Steroid BR6OX2/CYP85A2 low borderline