PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

2101
Candidate Protein Records
1832
Pathway-Level Records
4504
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Agluscaffold12576_cov940039260 Alkaloid T3O medium borderline
Agluscaffold13340_cov1000049870 Alkaloid T3O medium borderline
Agluscaffold13340_cov1000049900 Alkaloid T3O medium borderline
Agluscaffold13506_cov1020051090 Alkaloid T3O medium borderline
Agluscaffold13530_cov920051690 Alkaloid T3O medium pass
Agluscaffold13530_cov920051700 Alkaloid T3O low borderline
Agluscaffold13530_cov920051710 Alkaloid T3O medium borderline
Agluscaffold1359_cov950053730 Alkaloid T3O medium pass
Agluscaffold15599_cov830074670 Alkaloid T3O medium pass
Agluscaffold15624_cov1000074980 Alkaloid T3O medium pass
Agluscaffold1607_cov990080550 Alkaloid T3O low borderline
Agluscaffold1607_cov990080560 Alkaloid T3O low borderline
Agluscaffold16107_cov1070080930 Alkaloid T3O medium borderline
Agluscaffold16107_cov1070080940 Alkaloid T3O medium borderline
Agluscaffold16347_cov980083780 Alkaloid T3O medium borderline
Agluscaffold16385_cov1110084190 Alkaloid T3O medium pass
Agluscaffold16386_cov1030084380 Alkaloid T3O medium pass
Agluscaffold16596_cov810086490 Alkaloid T3O low borderline
Agluscaffold1659_cov870086520 Alkaloid T3O low borderline
Agluscaffold1687_cov930088530 Alkaloid T3O medium pass
Agluscaffold1691_cov680088620 Alkaloid T3O medium borderline
Agluscaffold17652_cov1040096280 Alkaloid T3O medium borderline
Agluscaffold17652_cov1040096290 Alkaloid T3O medium borderline
Agluscaffold17652_cov1040096300 Alkaloid T3O medium borderline
Agluscaffold17652_cov1040096310 Alkaloid T3O medium borderline
Agluscaffold18766_cov960105250 Alkaloid T3O low borderline
Agluscaffold19026_cov1000106830 Alkaloid T3O medium borderline
Agluscaffold19152_cov1030108130 Alkaloid T3O low borderline
Agluscaffold19223_cov1070109060 Alkaloid T3O medium borderline
Agluscaffold20410_cov1080121700 Alkaloid T3O low borderline
Agluscaffold20613_cov1020123690 Alkaloid T3O medium borderline
Agluscaffold20621_cov980123860 Alkaloid T3O medium pass
Agluscaffold21025_cov1020126670 Alkaloid T3O medium pass
Agluscaffold21166_cov880127650 Alkaloid T3O medium borderline
Agluscaffold21477_cov1070129580 Alkaloid T3O low borderline
Agluscaffold219777_cov960133280 Alkaloid T3O medium borderline
Agluscaffold21987_cov1020133550 Alkaloid T3O low borderline
Agluscaffold2219_cov990135040 Alkaloid T3O low borderline
Agluscaffold2231_cov950136220 Alkaloid T3O medium borderline
Agluscaffold22822_cov860141560 Alkaloid T3O medium pass
Agluscaffold2311_cov840143160 Alkaloid T3O medium borderline
Agluscaffold23591_cov1010145040 Alkaloid T3O medium borderline
Agluscaffold24310_cov700149340 Alkaloid T3O medium borderline
Agluscaffold244_cov940150140 Alkaloid T3O medium borderline
Agluscaffold24662_cov1010150800 Alkaloid T3O low borderline
Agluscaffold24662_cov1010150830 Alkaloid T3O medium pass
Agluscaffold24961_cov1100152400 Alkaloid T3O medium pass
Agluscaffold25560_cov1040156960 Alkaloid T3O medium pass
Agluscaffold2609_cov800159780 Alkaloid T3O medium borderline
Agluscaffold2609_cov800159860 Alkaloid T3O medium borderline