PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Agluscaffold425460_cov1020269200 Steroid CAS low borderline
Agluscaffold425554_cov670271050 Steroid CAS medium pass
Agluscaffold425649_cov990274040 Steroid CAS medium pass
Agluscaffold425760_cov950274830 Steroid CAS medium pass
Agluscaffold43127_cov1040282820 Steroid CAS medium pass
Agluscaffold43141_cov670282860 Steroid CAS low borderline
Agluscaffold4425_cov1020285980 Steroid CAS medium pass
Agluscaffold45070_cov600288990 Steroid CAS medium pass
Agluscaffold45857_cov720293080 Steroid CAS medium pass
Agluscaffold46748_cov800297040 Steroid CAS medium pass
Agluscaffold46748_cov800297050 Steroid CAS medium pass
Agluscaffold4750_cov1030300270 Steroid CAS low borderline
Agluscaffold4750_cov1030300320 Steroid CAS low borderline
Agluscaffold5740_cov960335710 Steroid CAS medium pass
Agluscaffold5740_cov960335760 Steroid CAS medium pass
Agluscaffold5740_cov960335770 Steroid CAS medium pass
Agluscaffold5747_cov1020335930 Steroid CAS medium pass
Agluscaffold61074_cov1240347150 Steroid CAS medium pass
Agluscaffold61074_cov1240347160 Steroid CAS medium pass
Agluscaffold61074_cov1240347170 Steroid CAS medium pass
Agluscaffold61074_cov1240347180 Steroid CAS medium pass
Agluscaffold62270_cov910350430 Steroid CAS medium pass
Agluscaffold6311_cov660354040 Steroid CAS medium pass
Agluscaffold6311_cov660354050 Steroid CAS medium pass
Agluscaffold6311_cov660354060 Steroid CAS low borderline
Agluscaffold6311_cov660354070 Steroid CAS low borderline
Agluscaffold6575_cov990360740 Steroid CAS medium pass
Agluscaffold6575_cov990360750 Steroid CAS low borderline
Agluscaffold67609_cov1050366430 Steroid CAS medium pass
Agluscaffold68891_cov1010368960 Steroid CAS medium pass
Agluscaffold68891_cov1010368970 Steroid CAS medium pass
Agluscaffold68891_cov1010368990 Steroid CAS medium pass
Agluscaffold7257_cov1120376390 Steroid CAS medium pass
Agluscaffold725_cov940376560 Steroid CAS medium pass
Agluscaffold84381_cov860404090 Steroid CAS low borderline
Agluscaffold873_cov1040410160 Steroid CAS medium pass
Agluscaffold920_cov1060419200 Steroid CAS medium pass
Agluscaffold10381_cov1020007040 Steroid CPD/CYP90A1 low borderline
Agluscaffold10381_cov1020007050 Steroid CPD/CYP90A1 low borderline
Agluscaffold11817_cov970030730 Steroid CPD/CYP90A1 medium borderline
Agluscaffold121800_cov990034010 Steroid CPD/CYP90A1 low borderline
Agluscaffold1607_cov990080550 Steroid CPD/CYP90A1 low borderline
Agluscaffold1607_cov990080560 Steroid CPD/CYP90A1 low borderline
Agluscaffold19262_cov910110160 Steroid CPD/CYP90A1 low borderline
Agluscaffold20613_cov1020123690 Steroid CPD/CYP90A1 medium borderline
Agluscaffold22275_cov940135810 Steroid CPD/CYP90A1 medium borderline
Agluscaffold2311_cov840143160 Steroid CPD/CYP90A1 low borderline
Agluscaffold23591_cov1010145040 Steroid CPD/CYP90A1 medium borderline
Agluscaffold23835_cov960146900 Steroid CPD/CYP90A1 low borderline
Agluscaffold24662_cov1010150830 Steroid CPD/CYP90A1 medium borderline