PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

2101
Candidate Protein Records
1832
Pathway-Level Records
4504
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Agluscaffold116_cov1030027880 Flavonoid F3H low borderline
Agluscaffold116_cov1030027890 Flavonoid F3H low borderline
Agluscaffold118656_cov990030990 Flavonoid F3H low borderline
Agluscaffold125339_cov820038380 Flavonoid F3H medium borderline
Agluscaffold12589_cov910039590 Flavonoid F3H medium borderline
Agluscaffold129623_cov1020044330 Flavonoid F3H medium borderline
Agluscaffold13530_cov920051680 Flavonoid F3H medium borderline
Agluscaffold1355_cov850052580 Flavonoid F3H medium pass
Agluscaffold137975_cov920055980 Flavonoid F3H medium borderline
Agluscaffold13817_cov1030056830 Flavonoid F3H low borderline
Agluscaffold143659_cov1000061260 Flavonoid F3H medium borderline
Agluscaffold14447_cov950062430 Flavonoid F3H medium borderline
Agluscaffold1478_cov1020066680 Flavonoid F3H medium pass
Agluscaffold1478_cov1020066690 Flavonoid F3H medium pass
Agluscaffold1495_cov1020069340 Flavonoid F3H medium borderline
Agluscaffold15210_cov1070071680 Flavonoid F3H low borderline
Agluscaffold153901_cov1020073410 Flavonoid F3H low borderline
Agluscaffold17817_cov900097830 Flavonoid F3H medium borderline
Agluscaffold179_cov1030098690 Flavonoid F3H medium borderline
Agluscaffold1814_cov810099820 Flavonoid F3H medium borderline
Agluscaffold1837_cov1040102310 Flavonoid F3H medium borderline
Agluscaffold193270_cov990111110 Flavonoid F3H medium borderline
Agluscaffold1946_cov1050112530 Flavonoid F3H medium borderline
Agluscaffold20049_cov1000118110 Flavonoid F3H medium borderline
Agluscaffold20079_cov980118460 Flavonoid F3H medium borderline
Agluscaffold20079_cov980118610 Flavonoid F3H medium borderline
Agluscaffold20137_cov1040119810 Flavonoid F3H medium borderline
Agluscaffold211262_cov1080127580 Flavonoid F3H medium borderline
Agluscaffold21574_cov1060129930 Flavonoid F3H medium borderline
Agluscaffold23835_cov960146910 Flavonoid F3H medium borderline
Agluscaffold25094_cov1050153890 Flavonoid F3H medium borderline
Agluscaffold25094_cov1050153900 Flavonoid F3H medium borderline
Agluscaffold30045_cov1060180830 Flavonoid F3H medium borderline
Agluscaffold3169_cov980190100 Flavonoid F3H medium borderline
Agluscaffold32986_cov970197670 Flavonoid F3H medium pass
Agluscaffold3389_cov1010202530 Flavonoid F3H low borderline
Agluscaffold3389_cov1010202540 Flavonoid F3H medium borderline
Agluscaffold3389_cov1010202570 Flavonoid F3H medium borderline
Agluscaffold3389_cov1010202580 Flavonoid F3H medium borderline
Agluscaffold34357_cov1060205650 Flavonoid F3H medium borderline
Agluscaffold34357_cov1060205670 Flavonoid F3H medium borderline
Agluscaffold37780_cov1070221990 Flavonoid F3H low borderline
Agluscaffold3786_cov1030222380 Flavonoid F3H medium borderline
Agluscaffold38979_cov880226240 Flavonoid F3H medium borderline
Agluscaffold38979_cov880226250 Flavonoid F3H medium borderline
Agluscaffold3913_cov1050226960 Flavonoid F3H medium borderline
Agluscaffold40592_cov910233150 Flavonoid F3H medium borderline
Agluscaffold424549_cov860251470 Flavonoid F3H medium borderline
Agluscaffold424613_cov1090254290 Flavonoid F3H medium borderline
Agluscaffold424623_cov1010255240 Flavonoid F3H medium borderline