PlantSME Plant secondary metabolism enzyme database

Alnus glutinosa (alnus_glutinosa)

Imported from atlas release summary for Alnus glutinosa.

1832
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 531 19 UGT (203) View species results
Alkaloid pathway 391 27 7DLGT (104) View species results
Phenylpropanoid pathway 360 13 POD (152) View species results
Flavonoid pathway 258 11 UFGT (185) View species results
Rosmarinic acid pathway 160 7 C4H (72) View species results
Steroid pathway 132 13 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1798 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 302 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Agluscaffold9446_cov770422860 Phenylpropanoid C3'H/CYP98A medium borderline
Agluscaffold94824_cov1110423410 Phenylpropanoid C3'H/CYP98A low borderline
Agluscaffold9741_cov910427710 Phenylpropanoid C3'H/CYP98A medium pass
Agluscaffold98410_cov870428760 Phenylpropanoid C3'H/CYP98A low borderline
Agluscaffold994_cov930429980 Phenylpropanoid C3'H/CYP98A low borderline
Agluscaffold11207_cov1010021870 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold13313_cov910049450 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold1706_cov1020090620 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold17652_cov1040096280 Phenylpropanoid C4H/CYP73A medium pass
Agluscaffold17652_cov1040096290 Phenylpropanoid C4H/CYP73A medium pass
Agluscaffold18614_cov820103950 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold2311_cov840143120 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold25350_cov920155320 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold27727_cov860167950 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold34126_cov1110204020 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold39010_cov1020226310 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold424545_cov1020251400 Phenylpropanoid C4H/CYP73A medium borderline
Agluscaffold424613_cov1090254250 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold42853_cov1040281600 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold46329_cov1090295440 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold4795_cov940301980 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold5326_cov650320900 Phenylpropanoid C4H/CYP73A medium borderline
Agluscaffold5326_cov650320930 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold5862_cov1010340780 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold6029_cov890344520 Phenylpropanoid C4H/CYP73A low borderline
Agluscaffold100531_cov1050001120 Phenylpropanoid CAD medium borderline
Agluscaffold10314_cov970005470 Phenylpropanoid CAD low borderline
Agluscaffold104643_cov1040010150 Phenylpropanoid CAD medium pass
Agluscaffold104643_cov1040010160 Phenylpropanoid CAD medium pass
Agluscaffold106391_cov960013110 Phenylpropanoid CAD low borderline
Agluscaffold10780_cov960015370 Phenylpropanoid CAD low borderline
Agluscaffold1126_cov630022410 Phenylpropanoid CAD medium pass
Agluscaffold11271_cov1070022590 Phenylpropanoid CAD medium borderline
Agluscaffold11341_cov990023180 Phenylpropanoid CAD medium pass
Agluscaffold1163_cov990026300 Phenylpropanoid CAD medium borderline
Agluscaffold1163_cov990026310 Phenylpropanoid CAD medium borderline
Agluscaffold1193_cov960031640 Phenylpropanoid CAD low borderline
Agluscaffold1312_cov740047020 Phenylpropanoid CAD low borderline
Agluscaffold1312_cov740047040 Phenylpropanoid CAD low borderline
Agluscaffold135167_cov1010051600 Phenylpropanoid CAD medium borderline
Agluscaffold1380_cov1090056200 Phenylpropanoid CAD medium pass
Agluscaffold1395_cov1040057870 Phenylpropanoid CAD medium borderline
Agluscaffold13974_cov1030058180 Phenylpropanoid CAD low borderline
Agluscaffold15691_cov1040075640 Phenylpropanoid CAD low borderline
Agluscaffold15797_cov1030077420 Phenylpropanoid CAD medium pass
Agluscaffold16388_cov840084400 Phenylpropanoid CAD low borderline
Agluscaffold16455_cov990084990 Phenylpropanoid CAD low borderline
Agluscaffold18707_cov950104460 Phenylpropanoid CAD medium pass
Agluscaffold22808_cov930140780 Phenylpropanoid CAD low borderline
Agluscaffold2450_cov810150170 Phenylpropanoid CAD medium borderline