PlantSME Plant secondary metabolism enzyme database

Alnus rubra (alnus_rubra)

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Imported from atlas release summary for Alnus rubra.

1961
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 583 21 UGT (227) View species results
Phenylpropanoid pathway 399 13 POD (167) View species results
Alkaloid pathway 395 21 7DLGT (114) View species results
Flavonoid pathway 271 11 UFGT (192) View species results
Rosmarinic acid pathway 173 7 C4H (68) View species results
Steroid pathway 140 14 CAS (84) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1623 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 301 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
alnus_rubra_ALNRU00032472-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00033296-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00033706-RA Flavonoid F3'H/CYP75B low borderline
alnus_rubra_ALNRU00034206-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00034214-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00039296-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00039527-RA Flavonoid F3'H/CYP75B low borderline
alnus_rubra_ALNRU00041141-RA Flavonoid F3'H/CYP75B low borderline
alnus_rubra_ALNRU00041148-RA Flavonoid F3'H/CYP75B low borderline
alnus_rubra_ALNRU00041205-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00041523-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00041706-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00042665-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00043424-RA Flavonoid F3'H/CYP75B low borderline
alnus_rubra_ALNRU00047045-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00051243-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00052669-RA Flavonoid F3'H/CYP75B low borderline
alnus_rubra_ALNRU00060055-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00064287-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00064292-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00064311-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00064326-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00073152-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00073305-RA Flavonoid F3'H/CYP75B low borderline
alnus_rubra_ALNRU00080511-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00080517-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00090402-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00091679-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00091716-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00094207-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00094212-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00098076-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00098077-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00106690-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00106713-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00111590-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00114399-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00121211-RA Flavonoid F3'H/CYP75B low borderline
alnus_rubra_ALNRU00121407-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00122270-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00123534-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00124558-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00124717-RA Flavonoid F3'H/CYP75B low borderline
alnus_rubra_ALNRU00125261-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00127145-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00127896-RA Flavonoid F3'H/CYP75B low borderline
alnus_rubra_ALNRU00129986-RA Flavonoid F3'H/CYP75B low borderline
alnus_rubra_ALNRU00132175-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00132181-RA Flavonoid F3'H/CYP75B medium borderline
alnus_rubra_ALNRU00132779-RA Flavonoid F3'H/CYP75B low borderline