PlantSME Plant secondary metabolism enzyme database

Citrus reticulata (citrus_reticulata)

Imported from atlas release summary for Citrus reticulata.

2792
Candidate Protein Records
2423
Pathway-Level Records
5786
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 681 19 BAHD (278) View species results
Alkaloid pathway 615 23 NMT (134) View species results
Phenylpropanoid pathway 481 12 POD (160) View species results
Flavonoid pathway 242 12 UFGT (142) View species results
Rosmarinic acid pathway 234 7 C4H (96) View species results
Steroid pathway 170 13 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2166 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 468 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Cretscaffold3182_cov750060140.1 Terpenoid UGT medium pass
Cretscaffold346_cov870063260.1 Terpenoid UGT medium pass
Cretscaffold36964_cov660064510.1 Terpenoid UGT medium pass
Cretscaffold39_cov910068810.1 Terpenoid UGT low borderline
Cretscaffold4070_cov900075480.1 Terpenoid UGT low borderline
Cretscaffold4070_cov900075490.1 Terpenoid UGT medium pass
Cretscaffold4070_cov900075500.1 Terpenoid UGT medium pass
Cretscaffold4070_cov900075510.1 Terpenoid UGT medium pass
Cretscaffold4070_cov900075520.1 Terpenoid UGT medium pass
Cretscaffold4070_cov900075530.1 Terpenoid UGT medium pass
Cretscaffold4070_cov900075560.1 Terpenoid UGT medium pass
Cretscaffold4070_cov900075570.1 Terpenoid UGT medium pass
Cretscaffold4070_cov900075580.1 Terpenoid UGT medium pass
Cretscaffold4070_cov900075590.1 Terpenoid UGT medium pass
Cretscaffold426_cov900079870.1 Terpenoid UGT medium pass
Cretscaffold426_cov900079880.1 Terpenoid UGT medium pass
Cretscaffold426_cov900080150.1 Terpenoid UGT low borderline
Cretscaffold426_cov900080190.1 Terpenoid UGT medium pass
Cretscaffold426_cov900080200.1 Terpenoid UGT medium pass
Cretscaffold426_cov900080210.1 Terpenoid UGT medium pass
Cretscaffold426_cov900080220.1 Terpenoid UGT medium pass
Cretscaffold426_cov900080240.1 Terpenoid UGT medium pass
Cretscaffold426_cov900080250.1 Terpenoid UGT low borderline
Cretscaffold429_cov910081810.1 Terpenoid UGT medium pass
Cretscaffold429_cov910083570.1 Terpenoid UGT medium pass
Cretscaffold429_cov910084370.1 Terpenoid UGT medium pass
Cretscaffold429_cov910084370.2 Terpenoid UGT medium pass
Cretscaffold429_cov910084380.1 Terpenoid UGT medium pass
Cretscaffold429_cov910084380.2 Terpenoid UGT medium pass
Cretscaffold429_cov910084390.1 Terpenoid UGT low borderline
Cretscaffold429_cov910084720.1 Terpenoid UGT medium pass
Cretscaffold43019_cov630087110.1 Terpenoid UGT medium pass
Cretscaffold43202_cov590087210.1 Terpenoid UGT medium pass
Cretscaffold454_cov1000090900.1 Terpenoid UGT medium pass
Cretscaffold480_cov830093280.1 Terpenoid UGT medium pass
Cretscaffold48556_cov690093510.1 Terpenoid UGT medium pass
Cretscaffold514_cov870098960.1 Terpenoid UGT medium pass
Cretscaffold514_cov870098970.1 Terpenoid UGT medium pass
Cretscaffold514_cov870100440.1 Terpenoid UGT medium pass
Cretscaffold514_cov870100450.1 Terpenoid UGT medium pass
Cretscaffold514_cov870100460.1 Terpenoid UGT medium pass
Cretscaffold514_cov870101730.1 Terpenoid UGT medium pass
Cretscaffold521_cov930105190.1 Terpenoid UGT medium pass
Cretscaffold521_cov930105200.1 Terpenoid UGT medium pass
Cretscaffold605_cov860113670.1 Terpenoid UGT medium pass
Cretscaffold605_cov860113670.2 Terpenoid UGT medium pass
Cretscaffold637_cov720115710.1 Terpenoid UGT medium pass
Cretscaffold637_cov720115730.1 Terpenoid UGT medium pass
Cretscaffold66068_cov550116580.1 Terpenoid UGT medium pass
Cretscaffold67707_cov1150117360.1 Terpenoid UGT medium pass