PlantSME Plant secondary metabolism enzyme database

Citrus reticulata (citrus_reticulata)

Imported from atlas release summary for Citrus reticulata.

2792
Candidate Protein Records
2423
Pathway-Level Records
5786
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 681 19 BAHD (278) View species results
Alkaloid pathway 615 23 NMT (134) View species results
Phenylpropanoid pathway 481 12 POD (160) View species results
Flavonoid pathway 242 12 UFGT (142) View species results
Rosmarinic acid pathway 234 7 C4H (96) View species results
Steroid pathway 170 13 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2166 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 468 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Cretscaffold69308_cov1250118080.1 Terpenoid UGT medium pass
Cretscaffold7398_cov850119360.1 Terpenoid UGT medium pass
Cretscaffold78096_cov1030120660.1 Terpenoid UGT medium pass
Cretscaffold78529_cov690121230.1 Terpenoid UGT medium pass
Cretscaffold81391_cov1610123140.1 Terpenoid UGT medium pass
Cretscaffold82281_cov1190124610.1 Terpenoid UGT medium pass
Cretscaffold8467_cov840134610.1 Terpenoid UGT medium pass
Cretscaffold85821_cov790137320.1 Terpenoid UGT medium pass
Cretscaffold85821_cov790137320.2 Terpenoid UGT medium pass
Cretscaffold85821_cov790137330.1 Terpenoid UGT medium pass
Cretscaffold85874_cov810139580.2 Terpenoid UGT low borderline
Cretscaffold85880_cov810141200.1 Terpenoid UGT medium pass
Cretscaffold85880_cov810141200.2 Terpenoid UGT medium pass
Cretscaffold85880_cov810141200.3 Terpenoid UGT medium pass
Cretscaffold85899_cov890143030.1 Terpenoid UGT medium pass
Cretscaffold85899_cov890143040.1 Terpenoid UGT medium pass
Cretscaffold85899_cov890144950.1 Terpenoid UGT medium pass
Cretscaffold85899_cov890144960.1 Terpenoid UGT medium pass
Cretscaffold85909_cov900151200.1 Terpenoid UGT medium pass
Cretscaffold85909_cov900151210.1 Terpenoid UGT medium pass
Cretscaffold85909_cov900151220.1 Terpenoid UGT medium pass
Cretscaffold85909_cov900151230.1 Terpenoid UGT medium pass
Cretscaffold85909_cov900151300.1 Terpenoid UGT low borderline
Cretscaffold85909_cov900151510.1 Terpenoid UGT medium pass
Cretscaffold85909_cov900151520.1 Terpenoid UGT medium pass
Cretscaffold85909_cov900151550.1 Terpenoid UGT medium pass
Cretscaffold85918_cov900169550.1 Terpenoid UGT medium pass
Cretscaffold85918_cov900169560.1 Terpenoid UGT medium pass
Cretscaffold85919_cov740174270.1 Terpenoid UGT medium pass
Cretscaffold85919_cov740174290.1 Terpenoid UGT medium pass
Cretscaffold85919_cov740174300.1 Terpenoid UGT low borderline
Cretscaffold85919_cov740174320.1 Terpenoid UGT low borderline
Cretscaffold85919_cov740174330.1 Terpenoid UGT low borderline
Cretscaffold85923_cov900177150.1 Terpenoid UGT medium pass
Cretscaffold85923_cov900178770.1 Terpenoid UGT medium pass
Cretscaffold85924_cov870182600.1 Terpenoid UGT low borderline
Cretscaffold85924_cov870182830.1 Terpenoid UGT medium pass
Cretscaffold85924_cov870182830.2 Terpenoid UGT medium pass
Cretscaffold85924_cov870182830.3 Terpenoid UGT medium pass
Cretscaffold85924_cov870182840.1 Terpenoid UGT medium pass
Cretscaffold85924_cov870182850.1 Terpenoid UGT low borderline
Cretscaffold85924_cov870182860.1 Terpenoid UGT medium pass
Cretscaffold85924_cov870183680.1 Terpenoid UGT medium pass
Cretscaffold85925_cov910186720.1 Terpenoid UGT medium pass
Cretscaffold85925_cov910186730.1 Terpenoid UGT medium pass
Cretscaffold85927_cov850190650.1 Terpenoid UGT medium pass
Cretscaffold85927_cov850190810.1 Terpenoid UGT medium pass
Cretscaffold85931_cov990191760.1 Terpenoid UGT medium pass
Cretscaffold85931_cov990191810.1 Terpenoid UGT medium pass
Cretscaffold85931_cov990191870.1 Terpenoid UGT medium pass