PlantSME Plant secondary metabolism enzyme database

Climacium americanum (climacium_americanum)

Imported from atlas release summary for Climacium americanum.

877
Candidate Protein Records
648
Pathway-Level Records
1636
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 173 10 POD (95) View species results
Terpenoid pathway 155 19 BAHD (57) View species results
Alkaloid pathway 119 18 NMT (27) View species results
Flavonoid pathway 88 8 UFGT (28) View species results
Rosmarinic acid pathway 73 7 C4H (30) View species results
Steroid pathway 40 12 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 600 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 109 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
CLame667550192560 Rosmarinic Acid C4H medium pass
CLame667630194730 Rosmarinic Acid C4H low borderline
CLame667760199100 Rosmarinic Acid C4H low borderline
CLame667830201000 Rosmarinic Acid C4H low borderline
CLame667840201780 Rosmarinic Acid C4H low borderline
CLame667920203800 Rosmarinic Acid C4H low borderline
CLame667990205480 Rosmarinic Acid C4H low borderline
CLame668030206150 Rosmarinic Acid C4H low borderline
CLame668030206170 Rosmarinic Acid C4H low borderline
CLame668030206420 Rosmarinic Acid C4H low borderline
CLame668110207810 Rosmarinic Acid C4H low borderline
CLame668120208660 Rosmarinic Acid C4H medium pass
CLame668620224760 Rosmarinic Acid C4H low borderline
CLame668620224770 Rosmarinic Acid C4H low borderline
CLame668950231390 Rosmarinic Acid C4H low borderline
CLame669030233770 Rosmarinic Acid C4H low borderline
CLame669080234670 Rosmarinic Acid C4H medium pass
CLame669180235460 Rosmarinic Acid C4H low borderline
CLame669180235510 Rosmarinic Acid C4H low borderline
CLame670410239260 Rosmarinic Acid C4H low borderline
CLame670450239570 Rosmarinic Acid C4H low borderline
CLame633650016740 Rosmarinic Acid CPR medium pass
CLame650570031130 Rosmarinic Acid CPR medium pass
CLame664770129910 Rosmarinic Acid CPR medium pass
CLame666200158260 Rosmarinic Acid CPR medium pass
CLame666920174300 Rosmarinic Acid CPR low borderline
CLame670200239050 Rosmarinic Acid HPPR medium pass
CLame618030014580 Rosmarinic Acid PAL high pass
CLame635670017540 Rosmarinic Acid PAL high pass
CLame644640022200 Rosmarinic Acid PAL high pass
CLame644640022220 Rosmarinic Acid PAL high pass
CLame648320026490 Rosmarinic Acid PAL high pass
CLame648650027290 Rosmarinic Acid PAL high pass
CLame649250028490 Rosmarinic Acid PAL high pass
CLame654390042100 Rosmarinic Acid PAL high pass
CLame655780048710 Rosmarinic Acid PAL high pass
CLame656810053510 Rosmarinic Acid PAL high pass
CLame658050061090 Rosmarinic Acid PAL high pass
CLame660170077600 Rosmarinic Acid PAL high pass
CLame660760082670 Rosmarinic Acid PAL high pass
CLame661330087710 Rosmarinic Acid PAL high pass
CLame666570166860 Rosmarinic Acid PAL low borderline
CLame667280185020 Rosmarinic Acid PAL high pass
CLame670680240790 Rosmarinic Acid PAL high pass
CLame658270062480 Rosmarinic Acid RAS medium pass
CLame659510071570 Rosmarinic Acid RAS low borderline
CLame664120121240 Rosmarinic Acid RAS low borderline
CLame664120121260 Rosmarinic Acid RAS low borderline
CLame665390142780 Rosmarinic Acid RAS low borderline
CLame665720148640 Rosmarinic Acid RAS medium pass