PlantSME Plant secondary metabolism enzyme database

Climacium americanum (climacium_americanum)

Imported from atlas release summary for Climacium americanum.

877
Candidate Protein Records
648
Pathway-Level Records
1636
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 173 10 POD (95) View species results
Terpenoid pathway 155 19 BAHD (57) View species results
Alkaloid pathway 119 18 NMT (27) View species results
Flavonoid pathway 88 8 UFGT (28) View species results
Rosmarinic acid pathway 73 7 C4H (30) View species results
Steroid pathway 40 12 CAS (17) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 600 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 109 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
CLame666230159080 Phenylpropanoid CCoAOMT medium pass
CLame533320006770 Phenylpropanoid COMT low borderline
CLame544630007540 Phenylpropanoid COMT medium pass
CLame632560016460 Phenylpropanoid COMT low borderline
CLame641600020490 Phenylpropanoid COMT medium pass
CLame645040022800 Phenylpropanoid COMT medium pass
CLame650680031530 Phenylpropanoid COMT low borderline
CLame659700073230 Phenylpropanoid COMT medium pass
CLame664690128820 Phenylpropanoid COMT low borderline
CLame665570147200 Phenylpropanoid COMT medium pass
CLame667710196840 Phenylpropanoid COMT medium pass
CLame667710196850 Phenylpropanoid COMT medium pass
CLame668140209600 Phenylpropanoid COMT low borderline
CLame668880230260 Phenylpropanoid COMT medium pass
CLame613580013540 Phenylpropanoid CSE medium pass
CLame641090019710 Phenylpropanoid CSE medium pass
CLame643160022060 Phenylpropanoid CSE low borderline
CLame648720027460 Phenylpropanoid CSE medium pass
CLame650680031480 Phenylpropanoid CSE medium pass
CLame655970049400 Phenylpropanoid CSE low borderline
CLame661850093210 Phenylpropanoid CSE medium pass
CLame662660103030 Phenylpropanoid CSE medium pass
CLame663030107890 Phenylpropanoid CSE medium pass
CLame665230140450 Phenylpropanoid CSE medium pass
CLame666220158890 Phenylpropanoid CSE medium pass
CLame667120180500 Phenylpropanoid CSE medium pass
CLame667560192650 Phenylpropanoid CSE medium pass
CLame667820200500 Phenylpropanoid CSE low borderline
CLame668820229200 Phenylpropanoid CSE medium pass
CLame656040049900 Phenylpropanoid F5H/CYP84A medium borderline
CLame656040049970 Phenylpropanoid F5H/CYP84A medium borderline
CLame663290111050 Phenylpropanoid F5H/CYP84A medium borderline
CLame664750129670 Phenylpropanoid F5H/CYP84A medium borderline
CLame664950133980 Phenylpropanoid F5H/CYP84A medium borderline
CLame665280141340 Phenylpropanoid F5H/CYP84A medium borderline
CLame668110207810 Phenylpropanoid F5H/CYP84A medium borderline
CLame670450239570 Phenylpropanoid F5H/CYP84A medium borderline
CLame655260046320 Phenylpropanoid HCT medium pass
CLame658270062480 Phenylpropanoid HCT medium pass
CLame664120121240 Phenylpropanoid HCT medium pass
CLame664120121260 Phenylpropanoid HCT low borderline
CLame665720148640 Phenylpropanoid HCT medium pass
CLame665880152400 Phenylpropanoid HCT medium pass
CLame666160157870 Phenylpropanoid HCT medium pass
CLame666620167630 Phenylpropanoid HCT medium pass
CLame666900174010 Phenylpropanoid HCT medium pass
CLame668510221270 Phenylpropanoid HCT low borderline
CLame652630035940 Phenylpropanoid LAC medium pass
CLame658580064720 Phenylpropanoid LAC low borderline
CLame663680116160 Phenylpropanoid LAC medium pass