PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Family-Level Assignments
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
codonopsis_lanceolata_Cl_chr02_61060T Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
codonopsis_lanceolata_Cl_chr02_61070T Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
codonopsis_lanceolata_Cl_chr03_00950T Rosmarinic Acid 4CL low borderline 4CL__00013__sp_Q84P23_4CLL9_ARATH
codonopsis_lanceolata_Cl_chr03_01660T Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
codonopsis_lanceolata_Cl_chr03_16360T Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
codonopsis_lanceolata_Cl_chr03_47280T Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
codonopsis_lanceolata_Cl_chr03_50060T Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
codonopsis_lanceolata_Cl_chr03_54400T Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
codonopsis_lanceolata_Cl_chr03_54410T Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
codonopsis_lanceolata_Cl_chr04_02390T Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
codonopsis_lanceolata_Cl_chr04_16970T Rosmarinic Acid 4CL medium pass 4CL__00006__sp_P17814_4CL1_ORYSJ
codonopsis_lanceolata_Cl_chr04_17000T Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
codonopsis_lanceolata_Cl_chr04_21220T Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
codonopsis_lanceolata_Cl_chr04_23340T Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
codonopsis_lanceolata_Cl_chr04_44930T Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
codonopsis_lanceolata_Cl_chr04_45870T Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
codonopsis_lanceolata_Cl_chr05_01050T Rosmarinic Acid 4CL low borderline 4CL__00008__sp_Q42982_4CL2_ORYSJ
codonopsis_lanceolata_Cl_chr05_01070T Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
codonopsis_lanceolata_Cl_chr05_24530T Rosmarinic Acid 4CL medium pass 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
codonopsis_lanceolata_Cl_chr05_24540T Rosmarinic Acid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
codonopsis_lanceolata_Cl_chr05_31180T Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
codonopsis_lanceolata_Cl_chr05_45000T Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
codonopsis_lanceolata_Cl_chr06_13850T Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
codonopsis_lanceolata_Cl_chr06_13860T Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
codonopsis_lanceolata_Cl_chr06_14940T Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
codonopsis_lanceolata_Cl_chr06_25160T Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
codonopsis_lanceolata_Cl_chr06_31660T Rosmarinic Acid 4CL low borderline 4CL__00001__sp_I3PB36_CNL_PETHY
codonopsis_lanceolata_Cl_chr06_37640T Rosmarinic Acid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
codonopsis_lanceolata_Cl_chr06_38290T Rosmarinic Acid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
codonopsis_lanceolata_Cl_chr06_38300T Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
codonopsis_lanceolata_Cl_chr06_42510T Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
codonopsis_lanceolata_Cl_chr07_06780T Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
codonopsis_lanceolata_Cl_chr07_25600T Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
codonopsis_lanceolata_Cl_chr08_08690T Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
codonopsis_lanceolata_Cl_chr08_14620T Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
codonopsis_lanceolata_Cl_chr08_15230T Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
codonopsis_lanceolata_Cl_chr08_15760T Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
codonopsis_lanceolata_Cl_chr08_21310T Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
codonopsis_lanceolata_Cl_chr08_21350T Rosmarinic Acid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
codonopsis_lanceolata_Cl_chr08_36140T Rosmarinic Acid 4CL low borderline 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ
codonopsis_lanceolata_Cl_chr08_36150T Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH