PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANR
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_C01657_unscaffolded_00010T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_C01657_unscaffolded_00050T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_C07360_unscaffolded_00010T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_C07360_unscaffolded_00020T Flavonoid ANR medium pass
codonopsis_lanceolata_Cl_C18882_unscaffolded_00010T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr01_30500T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr01_62700T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr02_02410T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr03_21920T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr03_22160T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr03_28320T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr04_06690T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr04_42680T Flavonoid ANR low borderline
codonopsis_lanceolata_Cl_chr04_42910T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr04_46580T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr05_06110T Flavonoid ANR low borderline
codonopsis_lanceolata_Cl_chr05_06120T Flavonoid ANR low borderline
codonopsis_lanceolata_Cl_chr06_04020T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr06_04030T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr06_04040T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr06_30430T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr07_05930T Flavonoid ANR high pass
codonopsis_lanceolata_Cl_chr07_05940T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr07_05960T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr07_06030T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr07_06080T Flavonoid ANR medium borderline
codonopsis_lanceolata_Cl_chr07_08650T Flavonoid ANR low borderline
codonopsis_lanceolata_Cl_chr07_09120T Flavonoid ANR low borderline
codonopsis_lanceolata_Cl_chr07_09130T Flavonoid ANR medium pass
codonopsis_lanceolata_Cl_chr07_38660T Flavonoid ANR medium borderline