PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status Best Target
codonopsis_lanceolata_Cl_C00134_unscaffolded_00050T Alkaloid COR medium pass COR__00005__sp_Q9SQ70_COR11_PAPSO
codonopsis_lanceolata_Cl_C00134_unscaffolded_00090T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_C00134_unscaffolded_00140T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_C00134_unscaffolded_00150T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_C00134_unscaffolded_00160T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_C14921_unscaffolded_00010T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_C14921_unscaffolded_00040T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_chr01_04450T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_chr01_12750T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_chr01_32300T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_chr01_32940T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_chr01_32970T Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
codonopsis_lanceolata_Cl_chr01_32980T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_chr01_32990T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_chr01_33010T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_chr01_33050T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_chr02_23230T Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
codonopsis_lanceolata_Cl_chr02_40810T Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
codonopsis_lanceolata_Cl_chr03_41410T Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
codonopsis_lanceolata_Cl_chr03_44080T Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
codonopsis_lanceolata_Cl_chr04_11630T Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
codonopsis_lanceolata_Cl_chr04_24240T Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
codonopsis_lanceolata_Cl_chr05_06740T Alkaloid COR medium pass COR__00001__sp_B9VRJ2_COR15_PAPSO
codonopsis_lanceolata_Cl_chr05_13710T Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
codonopsis_lanceolata_Cl_chr05_44170T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_chr06_21470T Alkaloid COR medium pass COR__00004__sp_Q9SQ69_COR12_PAPSO
codonopsis_lanceolata_Cl_chr07_17790T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO
codonopsis_lanceolata_Cl_chr08_18150T Alkaloid COR medium pass COR__00002__sp_Q9SQ67_COR14_PAPSO