PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_C22136_unscaffolded_00010T Flavonoid IFR medium pass
codonopsis_lanceolata_Cl_chr01_50950T Flavonoid IFR high pass
codonopsis_lanceolata_Cl_chr02_01510T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr02_16020T Flavonoid IFR high pass
codonopsis_lanceolata_Cl_chr02_16090T Flavonoid IFR high pass
codonopsis_lanceolata_Cl_chr02_16110T Flavonoid IFR medium pass
codonopsis_lanceolata_Cl_chr02_32770T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr02_35170T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr02_35430T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr02_35930T Flavonoid IFR high pass
codonopsis_lanceolata_Cl_chr02_35940T Flavonoid IFR high pass
codonopsis_lanceolata_Cl_chr02_35950T Flavonoid IFR high pass
codonopsis_lanceolata_Cl_chr02_35960T Flavonoid IFR high pass
codonopsis_lanceolata_Cl_chr02_35980T Flavonoid IFR high pass
codonopsis_lanceolata_Cl_chr02_49740T Flavonoid IFR medium borderline
codonopsis_lanceolata_Cl_chr03_06890T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr03_10250T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr03_26370T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr04_28640T Flavonoid IFR high pass
codonopsis_lanceolata_Cl_chr04_55320T Flavonoid IFR medium pass
codonopsis_lanceolata_Cl_chr05_08130T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr05_21390T Flavonoid IFR high pass
codonopsis_lanceolata_Cl_chr05_21400T Flavonoid IFR high pass
codonopsis_lanceolata_Cl_chr05_21450T Flavonoid IFR high pass
codonopsis_lanceolata_Cl_chr05_21870T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr05_28710T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr05_37390T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr05_39000T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr06_01630T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr06_35530T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr06_39360T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr07_11000T Flavonoid IFR low borderline
codonopsis_lanceolata_Cl_chr07_23780T Flavonoid IFR medium pass
codonopsis_lanceolata_Cl_chr08_20460T Flavonoid IFR low borderline