PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_C18029_unscaffolded_00010T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_C18029_unscaffolded_00020T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr01_02030T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr01_02070T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr01_17920T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr01_33850T Alkaloid 7DLH medium pass
codonopsis_lanceolata_Cl_chr01_33920T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr01_37990T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr01_63820T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr02_15550T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr02_35120T Alkaloid 7DLH low borderline
codonopsis_lanceolata_Cl_chr02_56250T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr02_56270T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr02_56280T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr02_56290T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr02_56470T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr02_56510T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr02_57740T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr03_45370T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr03_47710T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr03_51340T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr04_04980T Alkaloid 7DLH low borderline
codonopsis_lanceolata_Cl_chr04_13420T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr04_14910T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr04_40390T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr04_51300T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr04_51310T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr05_30420T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr06_28260T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr07_05200T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr07_10230T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr07_18270T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr07_29830T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr07_39210T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr08_12690T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr08_24560T Alkaloid 7DLH medium pass
codonopsis_lanceolata_Cl_chr08_24570T Alkaloid 7DLH medium pass
codonopsis_lanceolata_Cl_chr08_24610T Alkaloid 7DLH medium borderline
codonopsis_lanceolata_Cl_chr08_37470T Alkaloid 7DLH medium borderline