PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
codonopsis_lanceolata_Cl_chr01_16700T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr01_34180T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr02_04360T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr02_06610T Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
codonopsis_lanceolata_Cl_chr02_06620T Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
codonopsis_lanceolata_Cl_chr02_24660T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr02_24670T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr02_27330T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr02_37930T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr02_37940T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr02_37950T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr02_38670T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr02_46440T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr02_46480T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr02_54430T Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
codonopsis_lanceolata_Cl_chr02_64090T Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
codonopsis_lanceolata_Cl_chr02_64100T Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
codonopsis_lanceolata_Cl_chr03_23610T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr03_33650T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr03_49840T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr04_32550T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr07_39610T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
codonopsis_lanceolata_Cl_chr08_34130T Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA