PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_C00609_unscaffolded_00020T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_C16616_unscaffolded_00010T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_C16953_unscaffolded_00010T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_C17567_unscaffolded_00020T Steroid CPD/CYP90A1 low borderline
codonopsis_lanceolata_Cl_C18326_unscaffolded_00020T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_C19597_unscaffolded_00010T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_C19655_unscaffolded_00010T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr01_34010T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr01_43900T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr01_54410T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr01_59660T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr01_61330T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr02_20750T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr02_41720T Steroid CPD/CYP90A1 low borderline
codonopsis_lanceolata_Cl_chr02_42140T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr03_04360T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr03_05050T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr03_06650T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr03_20140T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr03_27700T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr03_39600T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr03_42560T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr03_43160T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr03_43170T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr03_43210T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr03_43240T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr04_04980T Steroid CPD/CYP90A1 low borderline
codonopsis_lanceolata_Cl_chr04_14910T Steroid CPD/CYP90A1 low borderline
codonopsis_lanceolata_Cl_chr04_31140T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr04_36240T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr04_51300T Steroid CPD/CYP90A1 low borderline
codonopsis_lanceolata_Cl_chr04_51310T Steroid CPD/CYP90A1 low borderline
codonopsis_lanceolata_Cl_chr05_04860T Steroid CPD/CYP90A1 medium pass
codonopsis_lanceolata_Cl_chr05_14250T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr05_14260T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr05_14270T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr05_14310T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr05_17740T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr05_17750T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr05_17760T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr05_17830T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr05_29790T Steroid CPD/CYP90A1 medium borderline
codonopsis_lanceolata_Cl_chr05_30420T Steroid CPD/CYP90A1 low borderline
codonopsis_lanceolata_Cl_chr06_36860T Steroid CPD/CYP90A1 low borderline
codonopsis_lanceolata_Cl_chr07_14960T Steroid CPD/CYP90A1 medium borderline