PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_C16486_unscaffolded_00010T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_C17213_unscaffolded_00010T Alkaloid GS high pass
codonopsis_lanceolata_Cl_C19072_unscaffolded_00010T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_C21707_unscaffolded_00010T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_C22015_unscaffolded_00010T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr01_17950T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr01_17960T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr01_28680T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr01_38690T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr01_38700T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr01_38730T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr01_38750T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr01_38760T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr01_38830T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr01_38860T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr01_38870T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr01_54560T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr01_55530T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr01_57960T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr01_59970T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr01_61520T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr01_61580T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr01_63940T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr02_00840T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr02_25100T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr02_35350T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr02_60480T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr02_60630T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr03_09330T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr03_09340T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr03_12280T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr03_16150T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr03_18030T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr03_18100T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr03_34030T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr03_44640T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr03_45430T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr03_49200T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr03_49210T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr04_10330T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr04_13980T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr04_24290T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr04_24300T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr04_24320T Alkaloid GS medium pass
codonopsis_lanceolata_Cl_chr04_24330T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr04_24340T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr04_25060T Alkaloid GS high pass
codonopsis_lanceolata_Cl_chr04_25690T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr04_26410T Alkaloid GS low borderline
codonopsis_lanceolata_Cl_chr04_33080T Alkaloid GS high pass