PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FNS
Reset
Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_C16533_unscaffolded_00010T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_C18904_unscaffolded_00010T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_C18948_unscaffolded_00010T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_C19155_unscaffolded_00010T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_C21829_unscaffolded_00010T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr01_22930T Flavonoid FNS low borderline
codonopsis_lanceolata_Cl_chr01_22980T Flavonoid FNS low borderline
codonopsis_lanceolata_Cl_chr01_27360T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr01_34300T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr01_36630T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr01_38930T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr01_53810T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr01_59640T Flavonoid FNS low borderline
codonopsis_lanceolata_Cl_chr02_04010T Flavonoid FNS low borderline
codonopsis_lanceolata_Cl_chr02_08810T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr02_20710T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr02_20750T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr02_54500T Flavonoid FNS medium pass
codonopsis_lanceolata_Cl_chr02_56050T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr03_25060T Flavonoid FNS low borderline
codonopsis_lanceolata_Cl_chr04_02120T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr04_03220T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr04_03230T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr04_03250T Flavonoid FNS low borderline
codonopsis_lanceolata_Cl_chr04_11930T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr04_13250T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr04_21490T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr04_27510T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr04_37090T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr04_40690T Flavonoid FNS low borderline
codonopsis_lanceolata_Cl_chr04_40710T Flavonoid FNS low borderline
codonopsis_lanceolata_Cl_chr04_53750T Flavonoid FNS low borderline
codonopsis_lanceolata_Cl_chr06_05820T Flavonoid FNS low borderline
codonopsis_lanceolata_Cl_chr06_27160T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr06_43080T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr07_14500T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr07_18950T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr08_03710T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr08_26010T Flavonoid FNS medium borderline
codonopsis_lanceolata_Cl_chr08_32760T Flavonoid FNS low borderline