PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
Reset
Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_C03177_unscaffolded_00020T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_C17675_unscaffolded_00010T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr01_56430T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr01_62710T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr01_62720T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr02_15890T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr02_36490T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr02_52450T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr03_21100T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr04_24460T Alkaloid PYKS medium pass
codonopsis_lanceolata_Cl_chr04_24550T Alkaloid PYKS medium pass
codonopsis_lanceolata_Cl_chr04_39660T Alkaloid PYKS high pass
codonopsis_lanceolata_Cl_chr04_39670T Alkaloid PYKS high pass
codonopsis_lanceolata_Cl_chr05_01270T Alkaloid PYKS high pass
codonopsis_lanceolata_Cl_chr05_03910T Alkaloid PYKS high pass
codonopsis_lanceolata_Cl_chr05_45740T Alkaloid PYKS high pass
codonopsis_lanceolata_Cl_chr06_10900T Alkaloid PYKS high pass
codonopsis_lanceolata_Cl_chr06_25670T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr06_42530T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr07_07720T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr07_22860T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr07_22890T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr08_11670T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr08_20360T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr08_24170T Alkaloid PYKS low borderline
codonopsis_lanceolata_Cl_chr08_31770T Alkaloid PYKS low borderline