PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_C10785_unscaffolded_00010T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_C12844_unscaffolded_00010T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_C16547_unscaffolded_00010T Phenylpropanoid CSE low borderline
codonopsis_lanceolata_Cl_C17725_unscaffolded_00010T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_C18770_unscaffolded_00040T Phenylpropanoid CSE low borderline
codonopsis_lanceolata_Cl_C19904_unscaffolded_00020T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_C21464_unscaffolded_00010T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr01_03940T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr01_07550T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr01_23460T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr01_24680T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr01_25190T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr01_30300T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr01_30400T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr01_39930T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr01_57890T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr01_62850T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr02_13880T Phenylpropanoid CSE low borderline
codonopsis_lanceolata_Cl_chr02_17480T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr02_17510T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr02_17670T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr02_21010T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr02_34780T Phenylpropanoid CSE low borderline
codonopsis_lanceolata_Cl_chr02_41950T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr02_46100T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr02_58550T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr02_60860T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr03_03000T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr03_10390T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr03_11320T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr03_11340T Phenylpropanoid CSE low borderline
codonopsis_lanceolata_Cl_chr03_16210T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr03_17760T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr03_18090T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr03_26000T Phenylpropanoid CSE low borderline
codonopsis_lanceolata_Cl_chr03_32120T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr03_33810T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr03_56530T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr03_56550T Phenylpropanoid CSE low borderline
codonopsis_lanceolata_Cl_chr03_56700T Phenylpropanoid CSE low borderline
codonopsis_lanceolata_Cl_chr03_56710T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr03_56720T Phenylpropanoid CSE low borderline
codonopsis_lanceolata_Cl_chr03_57080T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr04_15410T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr04_16660T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr04_30380T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr04_32710T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr04_32730T Phenylpropanoid CSE medium pass
codonopsis_lanceolata_Cl_chr04_34770T Phenylpropanoid CSE low borderline
codonopsis_lanceolata_Cl_chr04_34790T Phenylpropanoid CSE medium pass