PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr01_30460T Phenylpropanoid CCR medium borderline
codonopsis_lanceolata_Cl_chr01_30500T Phenylpropanoid CCR medium borderline
codonopsis_lanceolata_Cl_chr01_30510T Phenylpropanoid CCR medium borderline
codonopsis_lanceolata_Cl_chr01_62690T Phenylpropanoid CCR medium pass
codonopsis_lanceolata_Cl_chr01_62700T Phenylpropanoid CCR medium borderline
codonopsis_lanceolata_Cl_chr02_13060T Phenylpropanoid CCR medium borderline
codonopsis_lanceolata_Cl_chr02_22570T Phenylpropanoid CCR low borderline
codonopsis_lanceolata_Cl_chr02_36700T Phenylpropanoid CCR medium pass
codonopsis_lanceolata_Cl_chr03_02920T Phenylpropanoid CCR medium borderline
codonopsis_lanceolata_Cl_chr03_49270T Phenylpropanoid CCR medium pass
codonopsis_lanceolata_Cl_chr04_06690T Phenylpropanoid CCR medium borderline
codonopsis_lanceolata_Cl_chr04_42910T Phenylpropanoid CCR medium borderline
codonopsis_lanceolata_Cl_chr04_45750T Phenylpropanoid CCR medium pass
codonopsis_lanceolata_Cl_chr05_06110T Phenylpropanoid CCR medium pass
codonopsis_lanceolata_Cl_chr05_06120T Phenylpropanoid CCR medium pass
codonopsis_lanceolata_Cl_chr05_06820T Phenylpropanoid CCR medium borderline
codonopsis_lanceolata_Cl_chr05_06830T Phenylpropanoid CCR medium borderline
codonopsis_lanceolata_Cl_chr06_03800T Phenylpropanoid CCR medium pass
codonopsis_lanceolata_Cl_chr06_15920T Phenylpropanoid CCR low borderline
codonopsis_lanceolata_Cl_chr06_19450T Phenylpropanoid CCR low borderline
codonopsis_lanceolata_Cl_chr06_30430T Phenylpropanoid CCR medium borderline
codonopsis_lanceolata_Cl_chr07_05940T Phenylpropanoid CCR medium borderline
codonopsis_lanceolata_Cl_chr07_06050T Phenylpropanoid CCR low borderline
codonopsis_lanceolata_Cl_chr07_06080T Phenylpropanoid CCR medium pass
codonopsis_lanceolata_Cl_chr07_09130T Phenylpropanoid CCR medium pass
codonopsis_lanceolata_Cl_chr07_09160T Phenylpropanoid CCR low borderline
codonopsis_lanceolata_Cl_chr07_09170T Phenylpropanoid CCR medium pass
codonopsis_lanceolata_Cl_chr08_01090T Phenylpropanoid CCR medium pass