PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_C12990_unscaffolded_00020T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_C16120_unscaffolded_00010T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_C16533_unscaffolded_00010T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_C18009_unscaffolded_00030T Alkaloid G8O/G8H low borderline
codonopsis_lanceolata_Cl_C18323_unscaffolded_00010T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_C18904_unscaffolded_00010T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_C20114_unscaffolded_00010T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_C21944_unscaffolded_00010T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_C22588_unscaffolded_00010T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr01_11310T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr01_34020T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr01_34300T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr01_36630T Alkaloid G8O/G8H medium pass
codonopsis_lanceolata_Cl_chr01_38840T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr01_56300T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr01_56310T Alkaloid G8O/G8H medium pass
codonopsis_lanceolata_Cl_chr02_00730T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr02_02090T Alkaloid G8O/G8H low borderline
codonopsis_lanceolata_Cl_chr02_02340T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr02_02350T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr02_07870T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr02_08810T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr02_18030T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr02_18120T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr02_18210T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr02_42140T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr02_47530T Alkaloid G8O/G8H low borderline
codonopsis_lanceolata_Cl_chr02_55990T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr02_56050T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr02_58310T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr02_59580T Alkaloid G8O/G8H low borderline
codonopsis_lanceolata_Cl_chr03_02840T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr03_11070T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr03_11090T Alkaloid G8O/G8H low borderline
codonopsis_lanceolata_Cl_chr03_15580T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr03_42580T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr04_02120T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr04_08180T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr04_11930T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr04_12350T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr04_13250T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr04_37090T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr04_47410T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr04_53750T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr05_12520T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr05_27610T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr06_09150T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr07_05080T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr07_05090T Alkaloid G8O/G8H medium borderline
codonopsis_lanceolata_Cl_chr07_14500T Alkaloid G8O/G8H medium borderline