PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F5H/CYP84A
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Gene Pathway Family Confidence Status
codonopsis_lanceolata_Cl_C18009_unscaffolded_00020T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_C19155_unscaffolded_00020T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_C20114_unscaffolded_00010T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_C20152_unscaffolded_00040T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_C22117_unscaffolded_00010T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_C22588_unscaffolded_00010T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr01_00900T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr01_22980T Phenylpropanoid F5H/CYP84A low borderline
codonopsis_lanceolata_Cl_chr01_27360T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr01_34020T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr01_38930T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr01_38940T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr01_53810T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr02_00730T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr02_06060T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr02_07910T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr02_25560T Phenylpropanoid F5H/CYP84A low borderline
codonopsis_lanceolata_Cl_chr02_55980T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr02_55990T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr03_11480T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr03_15580T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr03_28560T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr03_42580T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr03_51340T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr04_03220T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr04_05690T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr04_08180T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr04_11850T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr04_11950T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr04_21490T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr04_47410T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr05_20320T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr07_04890T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr07_05090T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr07_14320T Phenylpropanoid F5H/CYP84A medium borderline
codonopsis_lanceolata_Cl_chr07_34570T Phenylpropanoid F5H/CYP84A low borderline