Codonopsis lanceolata (codonopsis_lanceolata)
Imported from atlas release summary for Codonopsis lanceolata.
2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2489
Candidate Genes
C4H
6.96%
C3'H/CYP98A
6.22%
BAHD
4.42%
UGT
4.21%
T3O
3.89%
IFS
3.87%
4CL
3.86%
CYP76
3.79%
Other Families
62.78%
More Families (97)
7DLGT
225
3.6%
UFGT
215
3.44%
POD
188
3.01%
CAS
171
2.74%
DWF4/CYP90B1
158
2.53%
TPS
147
2.35%
F3H
141
2.26%
F3'H/CYP75B
139
2.22%
CAD
136
2.18%
BBE
116
1.86%
GES
116
1.86%
STR
103
1.65%
BR6OX2/CYP85A2
101
1.62%
CYP71
92
1.47%
CODM/T6ODM
89
1.42%
NMT
85
1.36%
CYP90D1
84
1.34%
SGD
80
1.28%
H6H
78
1.25%
GS
78
1.25%
CSE
73
1.17%
TAT
68
1.09%
IO
67
1.07%
T16H
63
1.01%
G8O/G8H
51
0.82%
LAC
49
0.78%
SMT1/SMT2/SMT3
49
0.78%
F3'5'H/CYP75A
45
0.72%
CPD/CYP90A1
45
0.72%
TRI/TRII
44
0.7%
FNS
40
0.64%
HCT
40
0.64%
7DLH
39
0.62%
F5H/CYP84A
36
0.58%
CYP51G1
36
0.58%
IFR
34
0.54%
ANR
30
0.48%
DFR
29
0.46%
COR
28
0.45%
CCR
28
0.45%
PYKS
26
0.42%
SLS
25
0.4%
PMT
23
0.37%
NCS
23
0.37%
ANS/LDOX
22
0.35%
BR6OX1/CYP85A1
22
0.35%
COMT
19
0.3%
PAL
18
0.29%
ROT3/CYP90C1
18
0.29%
FPPS
18
0.29%
8HGO
17
0.27%
LAMT
16
0.26%
ISY
13
0.21%
RAS
13
0.21%
HPPR
12
0.19%
GGPPS
12
0.19%
CNMT
11
0.18%
MPO
11
0.18%
CPR
11
0.18%
DET2
11
0.18%
CYP80B1
10
0.16%
CHS
10
0.16%
SQE
9
0.14%
SQS/FDFT1
8
0.13%
HMGR
8
0.13%
CYP719
7
0.11%
AACT
7
0.11%
XMT_MXMT_DXMT
6
0.1%
6OMT_4OMT_SOMT
6
0.1%
16OMT
6
0.1%
FLS
6
0.1%
CCoAOMT
6
0.1%
DXS
6
0.1%
SMO1/SMO2
4
0.06%
CHI
3
0.05%
MVK
3
0.05%
MVD
3
0.05%
MCT/IspD
3
0.05%
DXR
3
0.05%
HDS/IspG
3
0.05%
PMK
3
0.05%
TYDC_DDC
2
0.03%
ADC
2
0.03%
ODC
2
0.03%
FK
2
0.03%
DWF1
2
0.03%
DWF7
2
0.03%
CPI1
2
0.03%
CMK/IspE
2
0.03%
HMGS
2
0.03%
GPPS
2
0.03%
TDC
1
0.02%
DWF5
1
0.02%
HYD1
1
0.02%
HDR/IspH
1
0.02%
MDS/IspF
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 715 | 20 | UGT (226) | View species results |
| Alkaloid pathway | 594 | 24 | 7DLGT (98) | View species results |
| Phenylpropanoid pathway | 439 | 12 | POD (165) | View species results |
| Flavonoid pathway | 303 | 11 | UFGT (197) | View species results |
| Rosmarinic acid pathway | 241 | 7 | C4H (105) | View species results |
| Steroid pathway | 197 | 15 | CAS (137) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 23 | 2584 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 329 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| codonopsis_lanceolata_Cl_chr06_03810T | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| codonopsis_lanceolata_Cl_chr06_03820T | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| codonopsis_lanceolata_Cl_chr06_06930T | Terpenoid | BAHD | medium | pass | BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE |
| codonopsis_lanceolata_Cl_chr06_07710T | Terpenoid | BAHD | medium | pass | BAHD__00014__sp_B9RK42_GPC1_RICCO |
| codonopsis_lanceolata_Cl_chr06_13750T | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| codonopsis_lanceolata_Cl_chr06_15490T | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| codonopsis_lanceolata_Cl_chr06_15500T | Terpenoid | BAHD | medium | pass | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| codonopsis_lanceolata_Cl_chr06_15950T | Terpenoid | BAHD | medium | pass | BAHD__00077__sp_Q9FNA9_PDAT1_ARATH |
| codonopsis_lanceolata_Cl_chr06_16120T | Terpenoid | BAHD | medium | pass | BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC |
| codonopsis_lanceolata_Cl_chr06_16130T | Terpenoid | BAHD | low | borderline | BAHD__00008__sp_A0A2Z5CVQ4_AT1_CROXC |
| codonopsis_lanceolata_Cl_chr06_17210T | Terpenoid | BAHD | medium | pass | BAHD__00032__sp_P0DO84_AT_STRNX |
| codonopsis_lanceolata_Cl_chr06_17220T | Terpenoid | BAHD | medium | pass | BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF |
| codonopsis_lanceolata_Cl_chr06_18690T | Terpenoid | BAHD | low | borderline | BAHD__00032__sp_P0DO84_AT_STRNX |
| codonopsis_lanceolata_Cl_chr06_19970T | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| codonopsis_lanceolata_Cl_chr06_20020T | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| codonopsis_lanceolata_Cl_chr06_20060T | Terpenoid | BAHD | medium | pass | BAHD__00040__sp_Q41745_LPAT_MAIZE |
| codonopsis_lanceolata_Cl_chr06_20070T | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| codonopsis_lanceolata_Cl_chr06_20140T | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| codonopsis_lanceolata_Cl_chr06_20190T | Terpenoid | BAHD | medium | pass | BAHD__00058__sp_Q8LG50_LPAT2_ARATH |
| codonopsis_lanceolata_Cl_chr06_31050T | Terpenoid | BAHD | medium | pass | BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN |
| codonopsis_lanceolata_Cl_chr06_32570T | Terpenoid | BAHD | medium | pass | BAHD__00026__sp_O64811_SCP9_ARATH |
| codonopsis_lanceolata_Cl_chr06_33050T | Terpenoid | BAHD | medium | pass | BAHD__00048__sp_Q5M757_ZDH15_ARATH |
| codonopsis_lanceolata_Cl_chr06_35960T | Terpenoid | BAHD | medium | pass | BAHD__00041__sp_Q4VCM1_LCAT2_ARATH |
| codonopsis_lanceolata_Cl_chr06_35970T | Terpenoid | BAHD | medium | pass | BAHD__00041__sp_Q4VCM1_LCAT2_ARATH |
| codonopsis_lanceolata_Cl_chr06_37280T | Terpenoid | BAHD | medium | pass | BAHD__00084__sp_Q9M115_ZDH16_ARATH |
| codonopsis_lanceolata_Cl_chr06_37670T | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| codonopsis_lanceolata_Cl_chr06_37720T | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| codonopsis_lanceolata_Cl_chr06_37730T | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |
| codonopsis_lanceolata_Cl_chr07_03360T | Terpenoid | BAHD | medium | pass | BAHD__00097__sp_Q9ZV87_NAPES_ARATH |
| codonopsis_lanceolata_Cl_chr07_04500T | Terpenoid | BAHD | medium | pass | BAHD__00059__sp_Q8S8S2_LPCT2_ARATH |
| codonopsis_lanceolata_Cl_chr07_07670T | Terpenoid | BAHD | medium | pass | BAHD__00048__sp_Q5M757_ZDH15_ARATH |
| codonopsis_lanceolata_Cl_chr07_08990T | Terpenoid | BAHD | medium | pass | BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC |
| codonopsis_lanceolata_Cl_chr07_10250T | Terpenoid | BAHD | medium | pass | BAHD__00083__sp_Q9LMM0_GPAT4_ARATH |
| codonopsis_lanceolata_Cl_chr07_13330T | Terpenoid | BAHD | medium | pass | BAHD__00042__sp_Q500Z2_ZDH20_ARATH |
| codonopsis_lanceolata_Cl_chr07_13840T | Terpenoid | BAHD | medium | borderline | BAHD__00044__sp_Q56WD9_THIK2_ARATH |
| codonopsis_lanceolata_Cl_chr07_14200T | Terpenoid | BAHD | medium | pass | BAHD__00033__sp_P0DXG0_AT_STRYX |
| codonopsis_lanceolata_Cl_chr07_19040T | Terpenoid | BAHD | medium | pass | BAHD__00093__sp_Q9SV07_ASAT1_ARATH |
| codonopsis_lanceolata_Cl_chr07_19760T | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| codonopsis_lanceolata_Cl_chr07_19770T | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| codonopsis_lanceolata_Cl_chr07_19800T | Terpenoid | BAHD | medium | pass | BAHD__00030__sp_O80816_GLC_ARATH |
| codonopsis_lanceolata_Cl_chr07_23770T | Terpenoid | BAHD | medium | pass | BAHD__00052__sp_Q8GWG0_GPAT9_ARATH |
| codonopsis_lanceolata_Cl_chr07_26740T | Terpenoid | BAHD | low | borderline | BAHD__00088__sp_Q9M7Z1_ODB2_ARATH |
| codonopsis_lanceolata_Cl_chr07_28490T | Terpenoid | BAHD | low | borderline | BAHD__00026__sp_O64811_SCP9_ARATH |
| codonopsis_lanceolata_Cl_chr07_28500T | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| codonopsis_lanceolata_Cl_chr07_31570T | Terpenoid | BAHD | low | borderline | BAHD__00055__sp_Q8H780_SCP13_ARATH |
| codonopsis_lanceolata_Cl_chr07_32720T | Terpenoid | BAHD | low | borderline | BAHD__00032__sp_P0DO84_AT_STRNX |
| codonopsis_lanceolata_Cl_chr07_33280T | Terpenoid | BAHD | medium | pass | BAHD__00025__sp_O64810_SCP10_ARATH |
| codonopsis_lanceolata_Cl_chr07_33360T | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| codonopsis_lanceolata_Cl_chr07_33380T | Terpenoid | BAHD | medium | pass | BAHD__00062__sp_Q93V61_LCAT3_ARATH |
| codonopsis_lanceolata_Cl_chr07_34200T | Terpenoid | BAHD | medium | pass | BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH |