PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2489
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
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Gene Pathway Family Confidence Status Best Target
codonopsis_lanceolata_Cl_chr05_23090T Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
codonopsis_lanceolata_Cl_chr05_45810T Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
codonopsis_lanceolata_Cl_chr06_04020T Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
codonopsis_lanceolata_Cl_chr06_04030T Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
codonopsis_lanceolata_Cl_chr06_04040T Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
codonopsis_lanceolata_Cl_chr06_07170T Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
codonopsis_lanceolata_Cl_chr06_08160T Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
codonopsis_lanceolata_Cl_chr06_14910T Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
codonopsis_lanceolata_Cl_chr06_24240T Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
codonopsis_lanceolata_Cl_chr06_33650T Phenylpropanoid CAD low borderline CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
codonopsis_lanceolata_Cl_chr06_33660T Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA
codonopsis_lanceolata_Cl_chr06_33690T Phenylpropanoid CAD low borderline CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
codonopsis_lanceolata_Cl_chr06_33700T Phenylpropanoid CAD low borderline CAD__00014__sp_Q2KNL5_CADH1_OCIBA
codonopsis_lanceolata_Cl_chr06_33710T Phenylpropanoid CAD medium pass CAD__00015__sp_Q6ZHS4_CADH2_ORYSJ
codonopsis_lanceolata_Cl_chr06_41780T Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
codonopsis_lanceolata_Cl_chr07_00250T Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
codonopsis_lanceolata_Cl_chr07_03770T Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
codonopsis_lanceolata_Cl_chr07_03830T Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
codonopsis_lanceolata_Cl_chr07_03930T Phenylpropanoid CAD low borderline CAD__00006__sp_I1ZHA5_CAD_CHAFM
codonopsis_lanceolata_Cl_chr07_03940T Phenylpropanoid CAD medium pass CAD__00006__sp_I1ZHA5_CAD_CHAFM
codonopsis_lanceolata_Cl_chr07_05930T Phenylpropanoid CAD low borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
codonopsis_lanceolata_Cl_chr07_06030T Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
codonopsis_lanceolata_Cl_chr07_06600T Phenylpropanoid CAD medium pass CAD__00003__sp_A0A2P1GIW4_REDX1_CATRO
codonopsis_lanceolata_Cl_chr07_23380T Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
codonopsis_lanceolata_Cl_chr07_28560T Phenylpropanoid CAD low borderline CAD__00010__sp_P48523_CADH4_ARATH
codonopsis_lanceolata_Cl_chr07_38640T Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
codonopsis_lanceolata_Cl_chr07_38650T Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
codonopsis_lanceolata_Cl_chr07_38660T Phenylpropanoid CAD medium borderline CAD__00005__sp_G7IYC1_CAD2_MEDTR
codonopsis_lanceolata_Cl_chr07_39110T Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
codonopsis_lanceolata_Cl_chr07_39120T Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
codonopsis_lanceolata_Cl_chr08_00480T Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
codonopsis_lanceolata_Cl_chr08_02200T Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
codonopsis_lanceolata_Cl_chr08_05600T Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
codonopsis_lanceolata_Cl_chr08_08740T Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE
codonopsis_lanceolata_Cl_chr08_08830T Phenylpropanoid CAD low borderline CAD__00011__sp_Q02971_CADH7_ARATH
codonopsis_lanceolata_Cl_chr08_31220T Phenylpropanoid CAD medium pass CAD__00002__sp_A0A0U4AHM6_CAD2_RAUSE